RetrogeneDB ID: | retro_chof_2486 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_79364:457..856(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSCHOG00000004622 | ||
Aliases: | None | ||
Description: | ribosomal protein S6 [Source:HGNC Symbol;Acc:10429] |
Percent Identity: | 75.19 % |
Parental protein coverage: | 52.85 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | GEKDIPGLTDTTVPRRLGPKRASR-RKL--LSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQ |
GEKD.PGL..T.VP..LG.KRASR..KL..LSK.DDV..Y.VRKP.NKE.KKPRTK.PKIQ..VTP.VLQ | |
Retrocopy | GEKDFPGLIYTIVPHHLGSKRASRIQKLFNLSK*DDVCHYIVRKPMNKEHKKPRTKVPKIQHFVTPHVLQ |
Parental | HKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK |
H.....A.KKQ.TKKNKEEAAEY.KLLAKRMKEAKEK.QEQ.AKR..LSSLRASTSKSESSQK | |
Retrocopy | HRHQHTAPKKQHTKKNKEEAAEYSKLLAKRMKEAKEKCQEQSAKRQSLSSLRASTSKSESSQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |