RetrogeneDB ID: | retro_ogar_1335 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873543.1:18907800..18908199(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSOGAG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein S6 [Source:HGNC Symbol;Acc:10429] |
Percent Identity: | 82.71 % |
Parental protein coverage: | 53.41 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | GEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQ |
GEKDIPGLTDT..P..L.PKRASRI.KL.NLSKEDDVRQY.VRKPLNK..KK.RTKAPKIQ.LVTP.VLQ | |
Retrocopy | GEKDIPGLTDTMIP*HLRPKRASRICKLLNLSKEDDVRQYDVRKPLNKGSKKSRTKAPKIQHLVTPCVLQ |
Parental | HKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK |
HK.R.IAL.KQ.TKK..EEAAEYAKLLAKRMKEAKEK.QEQIAKR..LSSLR.STSKSESSQK | |
Retrocopy | HKYRHIALRKQYTKKS*EEAAEYAKLLAKRMKEAKEKCQEQIAKRSSLSSLRTSTSKSESSQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |