RetrogeneDB ID: | retro_ogar_462 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873521.1:44890832..44891351(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSOGAG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein S6 [Source:HGNC Symbol;Acc:10429] |
Percent Identity: | 72.57 % |
Parental protein coverage: | 69.48 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | LLLSKGHSCYRPRRTGERKRKSVRGCIVDANLS-VLNLVIV-KKGEKDIPGLTDTTVPRRLGPKRASRIR |
LLLSK.HS.YRPRRTGERK.KSV.GCI.D.NLS..LNLVIV.KKGE..IPGL.DT.VP..LGP.RA.RI. | |
Retrocopy | LLLSKWHSFYRPRRTGERKSKSVQGCIADPNLS<FLNLVIV>KKGEEEIPGLIDTMVPHHLGPQRAGRIC |
Parental | KLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKL |
K.FNLSKEDD..QYV.RK.LNKEG.KPR.KAPKI..LVTP..LQHK.R..AL.KQ.TKKNKEE.A.Y.K. | |
Retrocopy | KFFNLSKEDDGHQYVLRKTLNKEGNKPRSKAPKIKHLVTPSILQHKCRHVALMKQYTKKNKEETAKYPKF |
Parental | LAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS |
.AKRMK.AKEK..E.I.KR..LSSL.ASTSKSE.S | |
Retrocopy | SAKRMKAAKEKCLE*IVKRCSLSSLKASTSKSEPS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |