RetrogeneDB ID: | retro_mluc_514 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429767:26221612..26222087(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSMLUG00000007588 | ||
Aliases: | None | ||
Description: | 40S ribosomal protein S6 [Source:UniProtKB/TrEMBL;Acc:G1P9K5] |
Percent Identity: | 86.42 % |
Parental protein coverage: | 64.66 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKG-YVVRISGGNDKQGFPMKQGVLT |
.K.NISFPATGCQKLIEV..ERKL.TFY.KRMATEVAAD.LGEE.KG.YVV.ISGGNDK..FPMK.GVLT | |
Retrocopy | VKPNISFPATGCQKLIEVGNERKLGTFYVKRMATEVAADSLGEELKG>YVVHISGGNDKRDFPMK*GVLT |
Parental | HGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRAS |
HGRV.LLLSKGHSCYRP.RTGER.RKSV.GCIVDANLSV.NLVIVKKGEKDIPGLT...VPRRLGPKRAS | |
Retrocopy | HGRVYLLLSKGHSCYRPSRTGERRRKSVQGCIVDANLSVHNLVIVKKGEKDIPGLT---VPRRLGPKRAS |
Parental | RIRKLFNLSKEDDVRKYVVRKP |
RIRKLFNLSKEDDV.KYVVRKP | |
Retrocopy | RIRKLFNLSKEDDVHKYVVRKP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |