RetrogeneDB ID: | retro_mluc_490 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | AAPE02070550:4331..4732(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSMLUG00000007588 | ||
Aliases: | None | ||
Description: | 40S ribosomal protein S6 [Source:UniProtKB/TrEMBL;Acc:G1P9K5] |
Percent Identity: | 71.53 % |
Parental protein coverage: | 54.22 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD-TTVPRRLGPKR |
..G...LLLSKGHSCYRPRR.GERK.K.V.GCIVD..LSVLNLVIV.KGEK.IPGLTD.TTVP.RLGP.R | |
Retrocopy | SRGSACLLLSKGHSCYRPRRSGERKHKFVQGCIVDVSLSVLNLVIVIKGEKVIPGLTD>TTVPPRLGPER |
Parental | ASRIRKLFNLSKEDDVRKYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRR-RIALKKQRTKKNK |
AS.IR.LF.L.K..DV...VVRKPLN.EG.KPRTKAPKI..LV.P.VLQHKRR..IALK.Q..K... | |
Retrocopy | ASCIRNLFHLPK--DVCQ*VVRKPLNIEGEKPRTKAPKIRCLVSPHVLQHKRR>CIALKEQCAKRRQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |