RetrogeneDB ID: | retro_mluc_1933 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429956:670901..671306(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSMLUG00000007588 | ||
Aliases: | None | ||
Description: | 40S ribosomal protein S6 [Source:UniProtKB/TrEMBL;Acc:G1P9K5] |
Percent Identity: | 73.38 % |
Parental protein coverage: | 54.62 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MKLNISFPATGCQKLIEVDDE-RKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG-FPMKQ-GV |
MKL.IS.PAT.CQKLI.VD.E..KL.TF.E.RMATEVAADALGEE.KGYVVR.S...DKQG.FPMKQ.G. | |
Retrocopy | MKLSISSPATDCQKLIGVDEE<MKLGTFCETRMATEVAADALGEERKGYVVRLSSEKDKQG<FPMKQ<GA |
Parental | LTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPK |
LTH.R..LLLS..H.C.RP.RT.ER..KSV..CIVDANLSVLNLVIVKKG.KDIPG.T.TTV..R.GPK | |
Retrocopy | LTHARAHLLLSQEHFCCRPKRTVERECKSVWSCIVDANLSVLNLVIVKKGKKDIPGPTETTVSCRQGPK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |