RetrogeneDB ID: | retro_mmur_919 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_13079:19639..20165(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YBX1 | ||
Ensembl ID: | ENSMICG00000014984 | ||
Aliases: | None | ||
Description: | Y box binding protein 1 [Source:HGNC Symbol;Acc:8014] |
Percent Identity: | 79.21 % |
Parental protein coverage: | 54.63 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANV |
A.KV.GTV.WF.VRNGYGFI.R.DT.EDVFV.QTAIKKNNPRKYLR.VGDGETV..DVV.GEKGAEAANV | |
Retrocopy | ARKVWGTVRWFSVRNGYGFIHRHDTEEDVFVPQTAIKKNNPRKYLRRVGDGETVGLDVVKGEKGAEAANV |
Parental | TGPGGIPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQR-RPYRRRRFP |
TGPGG.PVQGS.YAAD.NHYRRYPR.RGPP.N.QQNY..SESG.KN.GSESA.EGQAQQR..PYRR.RFP | |
Retrocopy | TGPGGVPVQGSTYAADGNHYRRYPRLRGPPHNHQQNY*ESESGKKNKGSESALEGQAQQR>GPYRRPRFP |
Parental | PYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRP |
PYYM.RPYG.RPQ.SNP.VQGEV..GADNQG....G.P | |
Retrocopy | PYYMQRPYGPRPQDSNPLVQGEV--GADNQG*ANAGLP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |