RetrogeneDB ID: | retro_nleu_1312 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397288.1:6391836..6392552(-) | ||
Located in intron of: | ENSNLEG00000014881 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YBX1 | ||
Ensembl ID: | ENSNLEG00000012324 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 95.83 % |
Parental protein coverage: | 73.77 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPP |
VHQTAIKKNNPRKYLRSVG.G.TVEFDVVEGEKGAEAANVTGPGGV.VQGSKYAADRNHYRRYPR.RGPP | |
Retrocopy | VHQTAIKKNNPRKYLRSVGYGATVEFDVVEGEKGAEAANVTGPGGVAVQGSKYAADRNHYRRYPRHRGPP |
Parental | RNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFP-PYYMRRPYGRRPQYSNPPVQGEVMEGADNQ |
R.YQQNYQNSESGEKNEGSESAPEGQAQQRR.YRRRRFP..YY.RRPYGRRPQYSNPPVQGEVMEGADNQ | |
Retrocopy | RSYQQNYQNSESGEKNEGSESAPEGQAQQRRRYRRRRFP<TYYKRRPYGRRPQYSNPPVQGEVMEGADNQ |
Parental | GAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPEN |
GAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED.NEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPEN | |
Retrocopy | GAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDSNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPEN |
Parental | PKPQDGKETKAADPPAENSSAPEAEQGGAE |
PKPQDGKETKAADPPAENSSAPEAEQGGAE | |
Retrocopy | PKPQDGKETKAADPPAENSSAPEAEQGGAE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |