RetrogeneDB ID: | retro_mputfur_690 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896935.1:8594089..8594867(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Nsa2 | ||
Ensembl ID: | ENSMPUG00000005795 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913883] |
Percent Identity: | 64.29 % |
Parental protein coverage: | 99.62 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 6 |
Parental | PQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKR |
PQN.YIELH.K..G..LDY.EKKRK.EG.E..E.SKK.K.MIGLK.KLYH.QR.AEKIQ.K.TI..HE.R | |
Retrocopy | PQNQYIELHWKHHGHCLDYQEKKRKREGMETQEHSKKTKRMIGLKGKLYH*QRQAEKIQTKMTIRTHERR |
Parental | NT-KQKNDEK-TPQGAV-PAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLP-KVRAQGETEVLKVIR |
........E..TP.G.V..A.LL.REG.S.A.V.SN..KQK..EKAGKWEVPLP.KV.AQGETEV.KV.. | |
Retrocopy | SSKQKNDGER<TP*GEV<AARLLGREGLSPAQVFSNGMKQKCQEKAGKWEVPLP>KVHAQGETEVWKVFQ |
Parental | TGKRKKKAWKRMVTKVCFVGDGFTR-KPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSP |
TGKR..KAWKR.VTKVCF...GF...KPPKYERF....GL....AH.TH.E.KATF.LPI.GVK.NPSSP | |
Retrocopy | TGKRNNKAWKRLVTKVCFPENGFLE<KPPKYERFCKANGLTLPNAHATHSEWKATFHLPIVGVKMNPSSP |
Parental | LYTTLGVIT-KGTVIEVNVSELGLVTQGGKVIWGKYAQV-TNNPENDGCINAVLLV |
L.TTLGVIT.KGTV...N..ELG.VTQGG..IWGK.A.V.TN.PE......A.LLV | |
Retrocopy | LRTTLGVIT>KGTVTKMNLRELGHVTQGGERIWGKHARV<TNDPESNRGTKAALLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |