RetrogeneDB ID: | retro_pvam_251 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_2168:9155..9400(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS26 | ||
Ensembl ID: | ENSPVAG00000007559 | ||
Aliases: | None | ||
Description: | ribosomal protein S26 [Source:HGNC Symbol;Acc:10414] |
Percent Identity: | 71.08 % |
Parental protein coverage: | 71.3 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP-PPRFR |
KAIK.FVI.NIVEA.A..DISEASVFD.YVLPKL..KL.YC.SCA.HSKVVRN.S.EA.K..TP.P..FR | |
Retrocopy | KAIKNFVI*NIVEATAIKDISEASVFDTYVLPKLCMKLYYCESCAMHSKVVRNHSPEAWKHLTP<PHQFR |
Parental | PAGAAPRPPPKPM |
...AAPRPPPK.. | |
Retrocopy | LVHAAPRPPPKEL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |