RetrogeneDB ID: | retro_etel_1734 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_290572:35343..35687(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000018635 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004510 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.1 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | TKKRRNNG-RAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK |
TKKRRNNG.RA.KGRGHVQPIRCTNCARC.PKDKAIKKFVIRNIVEA.AVRD.SEASVFDAYVLPKLYVK | |
Retrocopy | TKKRRNNG>RANKGRGHVQPIRCTNCARCAPKDKAIKKFVIRNIVEAVAVRDTSEASVFDAYVLPKLYVK |
Parental | LHYCVSCAIHSKVVRNRSR-EARKDRTPPPRFRPAGAAPRPPPKPM |
LH.CVSCAIHSKVVRNRSR.EARKD.TPPPRFRPAGAAPRPPPKPM | |
Retrocopy | LHDCVSCAIHSKVVRNRSR>EARKD*TPPPRFRPAGAAPRPPPKPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |