RetrogeneDB ID: | retro_pvam_1008 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_22177:2845..3189(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS26 | ||
Ensembl ID: | ENSPVAG00000007559 | ||
Aliases: | None | ||
Description: | ribosomal protein S26 [Source:HGNC Symbol;Acc:10414] |
Percent Identity: | 79.31 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK |
MTKK.RN.G.AKKGRGH.QPIRCTNCARC..K.KA.KKF.I.NIVEA.AVRDISEASVF.A..LPKLYVK | |
Retrocopy | MTKKGRNHGHAKKGRGHIQPIRCTNCARCISKNKATKKFII*NIVEATAVRDISEASVFNACILPKLYVK |
Parental | LHYCVSCAI-HSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM |
LHY.VSCA..HSK.VRNR.REA.KD.TPPP.FRPAGAA.R.PPKPM | |
Retrocopy | LHYRVSCAL<HSKIVRNRFREAWKD*TPPPGFRPAGAASRTPPKPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |