RetrogeneDB ID: | retro_lafr_464 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_17:50708280..50708623(-) | ||
Located in intron of: | ENSLAFG00000011142 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSLAFG00000013329 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.3 % |
Parental protein coverage: | 99.13 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKL |
TKKRRN.G.AKKG.GHV.P..CTN.A.C.P..KAIKKF.I.NIVEAAA.RDI.E.SVFDAYVLPK.YVKL | |
Retrocopy | TKKRRNSGHAKKGHGHV*PMCCTNSAHCMPTGKAIKKFIISNIVEAAAARDIFEVSVFDAYVLPKPYVKL |
Parental | HYCVSCAIHSKVVRNRSREARKDRTPPP-RFRPAGAAPRPPPKPM |
.YCV.CAIH.KVVR....EA.KD.TP....FRPAGA.P.P.PKPM | |
Retrocopy | CYCVNCAIHNKVVRSCTHEAWKDQTPLN>QFRPAGAVP*PRPKPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |