RetrogeneDB ID: | retro_lafr_768 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_37:7127118..7127458(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSLAFG00000013329 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 53.45 % |
Parental protein coverage: | 99.13 % |
Number of stop codons detected: | 7 |
Number of frameshifts detected | 2 |
Parental | QTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVI-RNIVEAAAVRDISEASVFDAYVLPKLYV |
.TKK.RNNGRA.KG.G...PI.C.N....VPKDKA.KK.VI..NI..A..........V..A.V.PKLY. | |
Retrocopy | KTKKKRNNGRA*KGHGDLHPICCRN*THSVPKDKASKKSVI<LNIEDACHQGHL*SKCVLNANVFPKLYL |
Parental | KLHYCVSCAIHSKVVRNRSREARKDRTP-PPRFRPAGAAPRPPPKP |
....C.SCAIHSKVVRN......K..TP.PP..R.A.AA..PPPKP | |
Retrocopy | EFY*CLSCAIHSKVVRNGFHGTWKH*TP<PP*YRSACAAV*PPPKP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |