RetrogeneDB ID: | retro_etel_1423 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_263352:8711..9040(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004510 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.57 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | TKKRRN-NGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK |
TKKR....GRA.KGRGHVQ.I.CT.C..CVPKDKA..KFVIRN.V.AAA.RDISE.SVFDA.VLP....K | |
Retrocopy | TKKRHE<GGRAEKGRGHVQSIGCTDCVCCVPKDKAMEKFVIRNVVKAAAIRDISEVSVFDAHVLP----K |
Parental | LHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM |
L..CV...IHS.VVRNRS.EA..DR...P.FRPAGAAP.PPPKPM | |
Retrocopy | LDDCVRSPIHSQVVRNRSCEAWQDRASAP*FRPAGAAP*PPPKPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |