Parental gene:

ENSETEG00000004510

Aliases:None
Description:None
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_8336:121..2720(+)


>ENSETEG00000004510
ACAAAGAAAAGGCGAAACAACGGCCGTGCCAAGAAAGGCCGCGGCCATGTGCAGCCCATTCGCTGCACCAACTGCGCCCG
CTGCGTGCCCAAAGACAAGGCCATCAAGAAGTTCGTCATAAGGAACATAGTGGAGGCCGCGGCCGTCAGAGACATTTCCG
AAGCGAGTGTCTTCGACGCATATGTGCTTCCTAAGTTGTATGTGAAGCTGCATTACTGTGTGAGTTGTGCCATTCACAGC
AAGGTGGTCAGAAACCGGTCACGTGAAGCCCGGAAGGACCGAACCCCCCCACCTCGCTTTAGACCTGCAGGTGCTGCCCC
ACGACCTCCTCCAAAGCCTATGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003260 possible_ortholog 7 retrogenes
retro_amel_1037, retro_amel_1240, retro_amel_303, retro_amel_777, retro_amel_926, retro_amel_927, retro_amel_928,
Bos taurus ENSBTAG00000038896 possible_ortholog 3 retrogenes
retro_btau_191, retro_btau_25, retro_btau_724,
Choloepus hoffmanni ENSCHOG00000001489 possible_ortholog 10 retrogenes
retro_chof_1367, retro_chof_1423, retro_chof_1793, retro_chof_1825, retro_chof_2156, retro_chof_2255, retro_chof_2482, retro_chof_382, retro_chof_611, retro_chof_756,
Cavia porcellus ENSCPOG00000023630 possible_ortholog 6 retrogenes
retro_cpor_115, retro_cpor_1231, retro_cpor_134, retro_cpor_173, retro_cpor_48, retro_cpor_992,
Dipodomys ordii ENSDORG00000001151 ortholog_one2one 2 retrogenes
retro_dord_239, retro_dord_279,
Felis catus ENSFCAG00000013977 possible_ortholog 10 retrogenes
retro_fcat_1211, retro_fcat_1332, retro_fcat_1460, retro_fcat_1728, retro_fcat_1851, retro_fcat_1948, retro_fcat_1949, retro_fcat_428, retro_fcat_508, retro_fcat_949,
Homo sapiens ENSG00000197728 possible_ortholog 13 retrogenes
retro_hsap_1000, retro_hsap_1665, retro_hsap_2289, retro_hsap_2301, retro_hsap_2691, retro_hsap_2977, retro_hsap_3978, retro_hsap_4120, retro_hsap_481, retro_hsap_4853, retro_hsap_498, retro_hsap_605, retro_hsap_946,
Gorilla gorilla ENSGGOG00000011566 possible_ortholog 6 retrogenes
retro_ggor_106, retro_ggor_121, retro_ggor_19, retro_ggor_55, retro_ggor_56, retro_ggor_63,
Loxodonta africana ENSLAFG00000013329 possible_ortholog 8 retrogenes
retro_lafr_180, retro_lafr_240, retro_lafr_40, retro_lafr_464, retro_lafr_513, retro_lafr_768, retro_lafr_835, retro_lafr_962,
Myotis lucifugus ENSMLUG00000029968 ortholog_one2many 10 retrogenes
retro_mluc_1153, retro_mluc_149, retro_mluc_1925, retro_mluc_2065, retro_mluc_2163, retro_mluc_2462, retro_mluc_266, retro_mluc_309, retro_mluc_332, retro_mluc_477,
Macaca mulatta ENSMMUG00000017042 possible_ortholog 7 retrogenes
retro_mmul_1009, retro_mmul_1017, retro_mmul_1676, retro_mmul_1944, retro_mmul_2092, retro_mmul_294, retro_mmul_646,
Mus musculus ENSMUSG00000025362 possible_ortholog 1 retrogene
retro_mmus_115,
Ochotona princeps ENSOPRG00000005721 possible_ortholog 3 retrogenes
retro_opri_437, retro_opri_497, retro_opri_860,
Pongo abelii ENSPPYG00000004642 possible_ortholog 16 retrogenes
retro_pabe_1234, retro_pabe_1372, retro_pabe_140, retro_pabe_1405, retro_pabe_1431, retro_pabe_155, retro_pabe_1613, retro_pabe_237, retro_pabe_25, retro_pabe_2835, retro_pabe_3068, retro_pabe_3399, retro_pabe_3432, retro_pabe_809, retro_pabe_903, retro_pabe_924,
Pan troglodytes ENSPTRG00000005075 possible_ortholog 1 retrogene
retro_ptro_74,
Pteropus vampyrus ENSPVAG00000007559 possible_ortholog 15 retrogenes
retro_pvam_1008, retro_pvam_1033, retro_pvam_1115, retro_pvam_1167, retro_pvam_1184, retro_pvam_1435, retro_pvam_251, retro_pvam_259, retro_pvam_298, retro_pvam_496, retro_pvam_644, retro_pvam_735, retro_pvam_871, retro_pvam_970, retro_pvam_984,
Rattus norvegicus ENSRNOG00000005517 possible_ortholog 1 retrogene
retro_rnor_196,
Sus scrofa ENSSSCG00000000374 possible_ortholog 2 retrogenes
retro_sscr_406, retro_sscr_650,
Ictidomys tridecemlineatus ENSSTOG00000010559 ortholog_one2one 12 retrogenes
retro_itri_1300, retro_itri_1446, retro_itri_1477, retro_itri_1488, retro_itri_289, retro_itri_418, retro_itri_469, retro_itri_470, retro_itri_643, retro_itri_652, retro_itri_729, retro_itri_871,
Tursiops truncatus ENSTTRG00000015012 possible_ortholog 16 retrogenes
retro_ttru_1169, retro_ttru_1300, retro_ttru_131, retro_ttru_1319, retro_ttru_1329, retro_ttru_1412, retro_ttru_1514, retro_ttru_1635, retro_ttru_17, retro_ttru_1734, retro_ttru_1795, retro_ttru_1897, retro_ttru_428, retro_ttru_47, retro_ttru_651, retro_ttru_893,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_38 89.38 99.12
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2. retro_etel_77 77.39 98.25
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3. retro_etel_155 80.51 100.00
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4. retro_etel_162 91.07 98.25
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5. retro_etel_181 87.50 81.58
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6. retro_etel_269 74.36 66.67
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7. retro_etel_354 86.21 100.00
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8. retro_etel_424 70.69 100.00
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9. retro_etel_462 75.21 99.12
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10. retro_etel_741 93.86 100.00
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11. retro_etel_894 79.82 100.00
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12. retro_etel_898 59.55 74.56
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13. retro_etel_1072 94.74 99.12
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14. retro_etel_1145 83.33 67.54
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15. retro_etel_1149 55.00 85.96
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16. retro_etel_1175 62.12 57.89
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17. retro_etel_1321 53.15 95.61
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18. retro_etel_1357 70.09 98.25
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19. retro_etel_1407 54.87 97.37
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20. retro_etel_1423 69.57 100.00
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21. retro_etel_1469 55.36 94.74
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22. retro_etel_1498 53.57 97.37
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23. retro_etel_1647 55.36 97.37
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24. retro_etel_1691 55.65 97.37
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25. retro_etel_1703 64.29 84.21
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26. retro_etel_1734 93.10 100.00
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27. retro_etel_1801 85.09 100.00
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28. retro_etel_1859 100.00 100.00
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29. retro_etel_1913 81.31 92.98
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30. retro_etel_1963 71.79 68.42
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31. retro_etel_2006 74.79 99.12
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32. retro_etel_2043 74.63 57.89
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33. retro_etel_2138 61.80 78.07
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34. retro_etel_2146 58.04 97.37
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35. retro_etel_2175 68.89 78.07
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Download FASTA sequences of all ENSETEG00000004510 retrocopies