RetrogeneDB ID: | retro_pvam_259 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_2218:165107..165433(-) | ||
Located in intron of: | ENSPVAG00000014585 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS26 | ||
Ensembl ID: | ENSPVAG00000007559 | ||
Aliases: | None | ||
Description: | ribosomal protein S26 [Source:HGNC Symbol;Acc:10414] |
Percent Identity: | 71.17 % |
Parental protein coverage: | 95.65 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | RNNGRAKKGRGHVQPIRCTNCARCVPKDKAIK-KFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC |
RNNGR..KG.GHV..I.CTNCA.C..KDK.IK..FVI.N..EA.AVRDIS..SVFD..VLPK.YVKLHY. | |
Retrocopy | RNNGRDIKGHGHV*CICCTNCAQCMLKDKTIK<EFVI*N-GEAVAVRDISKVSVFDPCVLPKMYVKLHYH |
Parental | VSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM |
..CA.HSKVVRN.S.EA.KD.TPP.RFRPAGAAP.PP.KPM | |
Retrocopy | ANCAVHSKVVRNCSHEAQKDGTPPSRFRPAGAAP*PPSKPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |