RetrogeneDB ID: | retro_etel_1149 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_218595:589..880(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000013002 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004510 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 55. % |
Parental protein coverage: | 85.96 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | HVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKL-YVKLHYCVSCAIHSKVVR |
HV..IRC.NCA.C.P.DK.IKKFVIRN.......R.........AYVLP...YV...YCVSCAI..KVVR | |
Retrocopy | HVHNIRCMNCACCEPRDKDIKKFVIRNSGDHSLERHF-HSKCLSAYVLPNR<YVLSRYCVSCAIYTKVVR |
Parental | NRSREARKDRTPPPRFRPAGAAPRP-PPKP |
NRS.EA.K....PP.FRP.G..P....PKP | |
Retrocopy | NRSHEAQKVQMFPPCFRPTGTGPMA>SPKP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |