RetrogeneDB ID: | retro_tbel_2105 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_100231:5653..5955(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTBEG00000002847 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.88 % |
Parental protein coverage: | 64.71 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | IMSSL-SKELR-QKYNVR-SMPIRKDDEVQVVRGHYK-GQQIGKVVQVYRKKYVIYIERVQREKANGTTV |
IMSSL.SKELR.QKYNV..SM...KDDEVQVVRGHYK.GQQIGKVVQV.RKK.V.Y.E.VQ.EK.NGTTV | |
Retrocopy | IMSSLLSKELR>QKYNVP>SMSTHKDDEVQVVRGHYK<GQQIGKVVQVDRKKNVLYSEWVQHEKTNGTTV |
Parental | HVGIHPSKVVITRLKLDKDR-KKILERKAKSRQV |
HVGIH.SK.VITRL..DKDR.KKIL..KAKS.QV | |
Retrocopy | HVGIHMSKAVITRLTPDKDR>KKILQCKAKSQQV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |