RetrogeneDB ID: | retro_tbel_470 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2167:121609..122006(-) | ||
Located in intron of: | ENSTBEG00000014255 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.37 % |
Parental protein coverage: | 86.27 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | VTSDRSKNRKRHFNAPSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRK |
V.S.R.KN.KRHFNAPSHIRRK.MSS.LS.ELRQKY.V.S.P.RKDD.VQ.VRGHYK.Q..GKVV.VYRK | |
Retrocopy | VQSFRGKNCKRHFNAPSHIRRKMMSSPLSNELRQKYSV*SLPFRKDDDVQAVRGHYKAQPSGKVVHVYRK |
Parental | KYVIYIERVQREKANGTTVHVGIH-PSKVVITRLKLDKDRKKILER-KAKSRQVGKEKNIRKKQS |
K.VIY.ER.Q.EKANGT..HVGIH.PS.V.ITRLKLDKD.KKIL...K.K..QVGKE....K... | |
Retrocopy | KHVIYVERLQWEKANGTEAHVGIH<PSEVLITRLKLDKDHKKILDG<KTKTHQVGKENGKYKEET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |