Parental gene:

ENSAMEG00000002453

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192808.1:1002466..1006631(+)


>ENSAMEG00000002453
ATGAAGTTCAATCCCTTTGTGACTTCTGACCGGAGCAAGAACCGTAAACGACATTTCAATGCACCTTCCCACATTCGCAG
GAAGATCATGTCTTCCCCTCTTTCCAAAGAGCTGAGACAGAAGTACAATGTTCGATCCATGCCCATCAGAAAGGATGATG
AAGTGCAGGTTGTGCGAGGACACTACAAAGGTCAGCAGATTGGCAAAGTCGTCCAGGTTTACAGGAAGAAGTACGTTATC
TACATAGAACGAGTGCAGCGAGAGAAGGCTAACGGCACAACCGTCCATGTGGGCATTCACCCTAGCAAGGTGGTTATCAC
TAGACTAAAACTGGACAAAGACCGCAAAAAGATCCTTGAACGTAAAGCCAAATCTCGCCAAGTAGGAAAGGAAAAGAATA
TAAGGAAGAAACAATCGAGAAAATGCAGGAGTAAAGTCATC

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011270 within_species_paralog 7 retrogenes
Bos taurus ENSBTAG00000012344 possible_ortholog 2 retrogenes
Choloepus hoffmanni ENSCHOG00000004703 possible_ortholog 10 retrogenes
Callithrix jacchus ENSCJAG00000014372 possible_ortholog 8 retrogenes
Cavia porcellus ENSCPOG00000001315 possible_ortholog 10 retrogenes
Dasypus novemcinctus ENSDNOG00000002470 possible_ortholog 3 retrogenes
Equus caballus ENSECAG00000015757 possible_ortholog 4 retrogenes
Felis catus ENSFCAG00000011259 possible_ortholog 13 retrogenes
Homo sapiens ENSG00000161970 possible_ortholog 27 retrogenes
Gorilla gorilla ENSGGOG00000023944 possible_ortholog 4 retrogenes
Macropus eugenii ENSMEUG00000009891 possible_ortholog 7 retrogenes
Myotis lucifugus ENSMLUG00000002176 possible_ortholog 1 retrogene
Macaca mulatta ENSMMUG00000003448 possible_ortholog 22 retrogenes
Monodelphis domestica ENSMODG00000006201 possible_ortholog 2 retrogenes
Mustela putorius furo ENSMPUG00000007988 possible_ortholog 12 retrogenes
Mus musculus ENSMUSG00000060938 possible_ortholog 21 retrogenes
Nomascus leucogenys ENSNLEG00000009981 possible_ortholog 1 retrogene
Oryctolagus cuniculus ENSOCUG00000006538 possible_ortholog 11 retrogenes
Otolemur garnettii ENSOGAG00000017070 possible_ortholog 3 retrogenes
Sorex araneus ENSSARG00000005798 possible_ortholog 13 retrogenes
Sarcophilus harrisii ENSSHAG00000006890 possible_ortholog 1 retrogene
Sus scrofa ENSSSCG00000028850 possible_ortholog 9 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000021923 possible_ortholog 6 retrogenes
Tupaia belangeri ENSTBEG00000007749 ortholog_one2one 53 retrogenes
Tarsius syrichta ENSTSYG00000001483 possible_ortholog 17 retrogenes
Vicugna pacos ENSVPAG00000000279 possible_ortholog 4 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_360 63.33 59.18
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2. retro_amel_499 71.11 89.12
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3. retro_amel_900 72.46 93.20
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4. retro_amel_1175 74.83 100.00
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5. retro_amel_1535 63.58 99.32
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6. retro_amel_1885 69.13 100.00
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7. retro_amel_1934 76.15 73.47
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Download FASTA sequences of all ENSAMEG00000002453 retrocopies