RetrogeneDB ID: | retro_tbel_404 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_1959:230675..231091(-) | ||
Located in intron of: | ENSTBEG00000016164 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.29 % |
Parental protein coverage: | 90.2 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MK.NPFVTS.RSKN.KRHFNAPSHIRRKIMSS.LSKELR.KY...SMPIRKD.EVQV.RGHYKGQQ.GKV | |
Retrocopy | MKINPFVTSNRSKNHKRHFNAPSHIRRKIMSSPLSKELRHKYIM*SMPIRKDNEVQVLRGHYKGQQTGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIH-PSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKKQS |
.QVYRKKYVIYIERVQREKANGTTV..GIH.PSKVVITRLKLDKDRKKILERKAKSRQV.KEK...K... | |
Retrocopy | IQVYRKKYVIYIERVQREKANGTTVRAGIH<PSKVVITRLKLDKDRKKILERKAKSRQVEKEKGKCKEET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |