RetrogeneDB ID: | retro_ggor_51 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 14:83655499..83655937(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSGGOG00000023726 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ENSG00000161970 | ||
Ensembl ID: | ENSGGOG00000023944 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 97.93 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNV.SMPIRKDDEVQVV.GHYKGQQIGKV | |
Retrocopy | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVQSMPIRKDDEVQVVQGHYKGQQIGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETI |
VQVYRKKYVIYIERVQREKANGTTVHVG.HPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETI | |
Retrocopy | VQVYRKKYVIYIERVQREKANGTTVHVGVHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETI |
Parental | EKMQE |
EKMQE | |
Retrocopy | EKMQE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .43 RPM | 27 .00 RPM |
SRP007412_cerebellum | 0 .16 RPM | 34 .39 RPM |
SRP007412_heart | 0 .09 RPM | 14 .35 RPM |
SRP007412_kidney | 0 .37 RPM | 78 .02 RPM |
SRP007412_liver | 0 .11 RPM | 74 .83 RPM |
SRP007412_testis | 0 .21 RPM | 44 .34 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_1376 |
Pan troglodytes | retro_ptro_73 |