Parental gene:

ENSAMEG00000014251

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192768.1:1365807..1368169(+)


>ENSAMEG00000014251
ATGGCCTCCGTCTCGGAGCTCGCTTGCATCTACTCGGCCCTCATCCTGCACGACGATGAGGTGACGGTCACGGAGGATAA
GATCAATGCCCTCATTAAAGCAGCGGGTGTGAATGTTGAACCTTTCTGGCCTGGCTTGTTTGCAAAGGCCCTGGCCAACA
TCAACATTGGGAGCCTCATCTGCAATGTAGGAGCTGGTGGACCCGCCCCAGCAGCTGGCGCTGCGCCAGCAGGAGGTCCT
GCTCCTTCCACCACTGCTGCCCCAGCTGAGGAGAAGAAAGTGGAAGCCAAGAAAGAAGAATCTGAGGAGTCTGATGATGA
CATGGGCTTTGGTCTTTTTGAC

Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000004321 ortholog_one2one 6 retrogenes
retro_cpor_1011, retro_cpor_1058, retro_cpor_260, retro_cpor_305, retro_cpor_667, retro_cpor_75,
Dasypus novemcinctus ENSDNOG00000014224 ortholog_one2one 26 retrogenes
retro_dnov_1130, retro_dnov_1325, retro_dnov_1410, retro_dnov_1439, retro_dnov_146, retro_dnov_1467, retro_dnov_1580, retro_dnov_1660, retro_dnov_1667, retro_dnov_17, retro_dnov_1748, retro_dnov_179, retro_dnov_1878, retro_dnov_1911, retro_dnov_1967, retro_dnov_20, retro_dnov_2075, retro_dnov_2234, retro_dnov_240, retro_dnov_2421, retro_dnov_2618, retro_dnov_2640, retro_dnov_405, retro_dnov_561, retro_dnov_601, retro_dnov_746,
Latimeria chalumnae ENSLACG00000012630 ortholog_many2many 1 retrogene
retro_lcha_7,
Macropus eugenii ENSMEUG00000015277 possible_ortholog 6 retrogenes
retro_meug_1096, retro_meug_1283, retro_meug_1312, retro_meug_1401, retro_meug_1515, retro_meug_793,
Macropus eugenii ENSMEUG00000015282 ortholog_many2many 2 retrogenes
retro_meug_207, retro_meug_45,
Monodelphis domestica ENSMODG00000009209 possible_ortholog 1 retrogene
retro_mdom_1022,
Monodelphis domestica ENSMODG00000009218 ortholog_many2many 4 retrogenes
retro_mdom_1168, retro_mdom_2001, retro_mdom_385, retro_mdom_50,
Oryctolagus cuniculus ENSOCUG00000015087 possible_ortholog 8 retrogenes
retro_ocun_1009, retro_ocun_1464, retro_ocun_1655, retro_ocun_1735, retro_ocun_48, retro_ocun_551, retro_ocun_647, retro_ocun_884,
Ochotona princeps ENSOPRG00000001163 possible_ortholog 11 retrogenes
retro_opri_1010, retro_opri_130, retro_opri_214, retro_opri_245, retro_opri_38, retro_opri_530, retro_opri_645, retro_opri_768, retro_opri_784, retro_opri_96, retro_opri_972,
Sarcophilus harrisii ENSSHAG00000014818 possible_ortholog 6 retrogenes
retro_shar_182, retro_shar_234, retro_shar_449, retro_shar_550, retro_shar_614, retro_shar_742,
Sus scrofa ENSSSCG00000004970 ortholog_one2one 16 retrogenes
retro_sscr_1105, retro_sscr_1165, retro_sscr_1184, retro_sscr_1185, retro_sscr_16, retro_sscr_176, retro_sscr_18, retro_sscr_259, retro_sscr_307, retro_sscr_323, retro_sscr_4, retro_sscr_47, retro_sscr_583, retro_sscr_776, retro_sscr_904, retro_sscr_923,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_110 76.67 78.95
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2. retro_amel_128 63.89 63.16
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3. retro_amel_161 84.62 78.95
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4. retro_amel_205 83.67 84.21
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5. retro_amel_316 68.00 85.96
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6. retro_amel_395 66.38 100.00
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7. retro_amel_404 71.68 95.61
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8. retro_amel_769 63.48 100.00
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9. retro_amel_1030 71.19 100.00
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10. retro_amel_1076 62.90 53.51
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11. retro_amel_1152 73.68 99.12
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12. retro_amel_1191 58.23 68.42
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13. retro_amel_1343 72.41 74.56
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14. retro_amel_1345 67.09 69.30
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15. retro_amel_1354 67.03 78.95
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16. retro_amel_1428 67.11 66.67
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17. retro_amel_1694 68.52 93.86
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18. retro_amel_1696 65.48 73.68
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19. retro_amel_1705 75.00 99.12
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20. retro_amel_1852 64.94 66.67
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Download FASTA sequences of all ENSAMEG00000014251 retrocopies