Parental gene:

ENSMODG00000009218

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:1:157043440..157046911(+)


>ENSMODG00000009218
GAAATGGCAGTCTCCGAGCTCGCTTGCATCTACTCCGCTCTCATCCTTCACGATGATGAGGTTACAGTTACGGAGGATAA
AATTAATGCTCTCATTAAAGCAGCAGGTGTAAATGTTGAACCATTCTGGCCTGGATTATTTGCAAAGGCCTTAAACAATG
TAAACATTGGCAGTCTCATCTGCAATGTAGGAGTTGGTGGCCCTGCCCCAGCAGCTGGTGGTGCTGCCCCTGCTGGAGGT
GCTGCCCCTGCTAGCACAGCTGCCCCTGCTGAGGAGAAGAAGAAAGAGGAAGCAAAAAAAGAAGAATCGGAGGAATCTGA
TGATGATATGGGCTTTGGTCTGTTTGACTAA

Library Parental gene expression (RPM)
SRP007412_brain 676 .80 RPM
SRP007412_cerebellum 470 .09 RPM
SRP007412_heart 1522 .45 RPM
SRP007412_kidney 1632 .87 RPM
SRP007412_liver 1362 .94 RPM
SRP007412_testis 214 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014251 ortholog_many2many 20 retrogenes
retro_amel_1030, retro_amel_1076, retro_amel_110, retro_amel_1152, retro_amel_1191, retro_amel_128, retro_amel_1343, retro_amel_1345, retro_amel_1354, retro_amel_1428, retro_amel_161, retro_amel_1694, retro_amel_1696, retro_amel_1705, retro_amel_1852, retro_amel_205, retro_amel_316, retro_amel_395, retro_amel_404, retro_amel_769,
Choloepus hoffmanni ENSCHOG00000005944 ortholog_many2many 10 retrogenes
retro_chof_1312, retro_chof_1527, retro_chof_1753, retro_chof_1944, retro_chof_2325, retro_chof_2461, retro_chof_2714, retro_chof_337, retro_chof_666, retro_chof_928,
Cavia porcellus ENSCPOG00000004321 ortholog_one2many 6 retrogenes
retro_cpor_1011, retro_cpor_1058, retro_cpor_260, retro_cpor_305, retro_cpor_667, retro_cpor_75,
Dasypus novemcinctus ENSDNOG00000014224 ortholog_many2many 26 retrogenes
retro_dnov_1130, retro_dnov_1325, retro_dnov_1410, retro_dnov_1439, retro_dnov_146, retro_dnov_1467, retro_dnov_1580, retro_dnov_1660, retro_dnov_1667, retro_dnov_17, retro_dnov_1748, retro_dnov_179, retro_dnov_1878, retro_dnov_1911, retro_dnov_1967, retro_dnov_20, retro_dnov_2075, retro_dnov_2234, retro_dnov_240, retro_dnov_2421, retro_dnov_2618, retro_dnov_2640, retro_dnov_405, retro_dnov_561, retro_dnov_601, retro_dnov_746,
Felis catus ENSFCAG00000032037 ortholog_many2many 23 retrogenes
retro_fcat_1034, retro_fcat_1047, retro_fcat_1089, retro_fcat_1207, retro_fcat_1244, retro_fcat_1436, retro_fcat_1466, retro_fcat_1550, retro_fcat_1580, retro_fcat_1594, retro_fcat_1617, retro_fcat_1797, retro_fcat_1972, retro_fcat_552, retro_fcat_56, retro_fcat_571, retro_fcat_597, retro_fcat_825, retro_fcat_849, retro_fcat_908, retro_fcat_92, retro_fcat_928, retro_fcat_947,
Latimeria chalumnae ENSLACG00000012630 ortholog_many2many 1 retrogene
retro_lcha_7,
Macropus eugenii ENSMEUG00000015277 possible_ortholog 6 retrogenes
retro_meug_1096, retro_meug_1283, retro_meug_1312, retro_meug_1401, retro_meug_1515, retro_meug_793,
Macropus eugenii ENSMEUG00000015282 ortholog_many2many 2 retrogenes
retro_meug_207, retro_meug_45,
Monodelphis domestica ENSMODG00000009209 within_species_paralog 1 retrogene
retro_mdom_1022,
Mustela putorius furo ENSMPUG00000017096 ortholog_many2many 2 retrogenes
retro_mputfur_1016, retro_mputfur_266,
Oryctolagus cuniculus ENSOCUG00000015087 possible_ortholog 8 retrogenes
retro_ocun_1009, retro_ocun_1464, retro_ocun_1655, retro_ocun_1735, retro_ocun_48, retro_ocun_551, retro_ocun_647, retro_ocun_884,
Ochotona princeps ENSOPRG00000001163 possible_ortholog 11 retrogenes
retro_opri_1010, retro_opri_130, retro_opri_214, retro_opri_245, retro_opri_38, retro_opri_530, retro_opri_645, retro_opri_768, retro_opri_784, retro_opri_96, retro_opri_972,
Sarcophilus harrisii ENSSHAG00000014818 possible_ortholog 6 retrogenes
retro_shar_182, retro_shar_234, retro_shar_449, retro_shar_550, retro_shar_614, retro_shar_742,
Sus scrofa ENSSSCG00000004970 ortholog_many2many 16 retrogenes
retro_sscr_1105, retro_sscr_1165, retro_sscr_1184, retro_sscr_1185, retro_sscr_16, retro_sscr_176, retro_sscr_18, retro_sscr_259, retro_sscr_307, retro_sscr_323, retro_sscr_4, retro_sscr_47, retro_sscr_583, retro_sscr_776, retro_sscr_904, retro_sscr_923,
Tursiops truncatus ENSTTRG00000013656 ortholog_many2many 20 retrogenes
retro_ttru_1388, retro_ttru_1502, retro_ttru_1645, retro_ttru_1730, retro_ttru_182, retro_ttru_1820, retro_ttru_1826, retro_ttru_227, retro_ttru_266, retro_ttru_28, retro_ttru_389, retro_ttru_553, retro_ttru_626, retro_ttru_666, retro_ttru_679, retro_ttru_687, retro_ttru_711, retro_ttru_755, retro_ttru_768, retro_ttru_803,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_50 96.55 100.00
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2. retro_mdom_385 74.36 67.24
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3. retro_mdom_1168 66.27 71.55
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4. retro_mdom_2001 80.52 64.66
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Download FASTA sequences of all ENSMODG00000009218 retrocopies