Parental gene: | HSPE1, ENSGGOG00000027944 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 2b:85859933..85862756(+) |
>ENSGGOG00000027944
ATGGCAGGACAAGCGTTTAGAAAGTTTCTTCCACTCTTTGACCGAGTATTGGTTGAAAGGAGTGCTGCTGAGACTGTAAC
CAAAGGAGGCATTATGCTTCCAGAAAAATCTCAAGGAAAAGTATTGCAAGCAACAGTAGTCGCTGTTGGATCGGGTTCTA
AAGGAAAGGGTGGAGAGATTCAACCAGTTAGCGTGAAAGTTGGAGATAAAGTTCTTCTCCCAGAATATGGAGGCACCAAA
GTAGTTCTAGATGACAAGGATTATTTCCTATTTAGAGATGGTGACATTCTTGGAAAGTACGTAGACTGA
ATGGCAGGACAAGCGTTTAGAAAGTTTCTTCCACTCTTTGACCGAGTATTGGTTGAAAGGAGTGCTGCTGAGACTGTAAC
CAAAGGAGGCATTATGCTTCCAGAAAAATCTCAAGGAAAAGTATTGCAAGCAACAGTAGTCGCTGTTGGATCGGGTTCTA
AAGGAAAGGGTGGAGAGATTCAACCAGTTAGCGTGAAAGTTGGAGATAAAGTTCTTCTCCCAGAATATGGAGGCACCAAA
GTAGTTCTAGATGACAAGGATTATTTCCTATTTAGAGATGGTGACATTCTTGGAAAGTACGTAGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 66 .03 RPM |
| SRP007412_cerebellum | 33 .29 RPM |
| SRP007412_heart | 38 .15 RPM |
| SRP007412_kidney | 204 .49 RPM |
| SRP007412_liver | 113 .82 RPM |
| SRP007412_testis | 58 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007417 | possible_ortholog | 17 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004008 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013246 | ortholog_one2many | 27 retrogenes |
retro_dnov_1088, retro_dnov_1117, retro_dnov_1214, retro_dnov_1375, retro_dnov_1391, retro_dnov_1405, retro_dnov_1412, retro_dnov_1428, retro_dnov_1445, retro_dnov_1546, retro_dnov_1647, retro_dnov_1652, retro_dnov_1686, retro_dnov_1821, retro_dnov_2176, retro_dnov_2291, retro_dnov_2413, retro_dnov_2569, retro_dnov_2625, retro_dnov_2652, retro_dnov_418, retro_dnov_481, retro_dnov_483, retro_dnov_490, retro_dnov_524, retro_dnov_554, retro_dnov_966,
|
| Erinaceus europaeus | ENSEEUG00000005040 | possible_ortholog | 6 retrogenes | |
| Mus musculus | ENSMUSG00000073676 | possible_ortholog | 11 retrogenes | |
| Procavia capensis | ENSPCAG00000009541 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000016078 | ortholog_one2many | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_117 | 93.68 | 93.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_157 | 91.00 | 98.04 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_775 | 84.31 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_841 | 70.41 | 94.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_897 | 91.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ggor_1051 | 95.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ggor_1243 | 95.19 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ggor_1545 | 75.27 | 89.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ggor_1676 | 64.76 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_ggor_1821 | 84.38 | 94.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_ggor_1956 | 58.46 | 61.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_ggor_1957 | 62.50 | 58.82 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_ggor_1958 | 72.16 | 92.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_ggor_2331 | 77.67 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_ggor_2391 | 57.00 | 96.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_ggor_2476 | 71.84 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_ggor_2492 | 57.00 | 96.08 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000027944 retrocopies