RetrogeneDB ID: | retro_chof_1880 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_413404:779..1010(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HSPE1 | ||
Ensembl ID: | ENSCHOG00000007417 | ||
Aliases: | None | ||
Description: | heat shock 10kDa protein 1 (chaperonin 10) [Source:HGNC Symbol;Acc:5269] |
Percent Identity: | 70.13 % |
Parental protein coverage: | 75.49 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | VTKGGIMLPEKSQGKVLQATVLAVGSGAKGKGGQIEPVSVKVGDKVLLPEYGGTKVVLEEKEYFLFRDSD |
VTKG.IMLPEKS.G.VLQATV..VGS..KGKGG..EP.S..VGDKVLLP.Y.GTKVVL.....FLFR..D | |
Retrocopy | VTKGDIMLPEKSPGRVLQATVVVVGS*SKGKGGDTEPISMNVGDKVLLPKYAGTKVVLDDENNFLFRVGD |
Parental | ILGKYIE |
IL.KY.E | |
Retrocopy | ILEKYVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |