RetrogeneDB ID: | retro_chof_91 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | GeneScaffold_1784:125786..126068(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HSPE1 | ||
Ensembl ID: | ENSCHOG00000007417 | ||
Aliases: | None | ||
Description: | heat shock 10kDa protein 1 (chaperonin 10) [Source:HGNC Symbol;Acc:5269] |
Percent Identity: | 73.4 % |
Parental protein coverage: | 92.16 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | FLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVLAVGSGAKGKGGQIEPVSVKVGDKVLLPEYGG |
FL.LFDR.LVER.AAETVTK.GIMLPEKSQG..LQAT..AVGSG.K.KG....PV.V.VG.K.LLPEYGG | |
Retrocopy | FLFLFDRILVERNAAETVTKEGIMLPEKSQGEILQATAVAVGSGSKEKGRGSQPVNVQVGAKGLLPEYGG |
Parental | TKVVLEEKEYFLFRDSDILGKYIE |
TKV.L..K.YFLFRD.D.LGKY.E | |
Retrocopy | TKVILGDKDYFLFRDADTLGKYVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |