Parental gene:

Hspe1, ENSMUSG00000073676

Aliases:Hspe1, 10kDa, Hsp10, mt-cpn10
Description:heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
Organism:Mouse (Mus musculus)
Coordinates:1:55088131..55091307(+)


>ENSMUSG00000073676
ATGGCTGGACAAGCTTTTAGGAAGTTTCTTCCGCTCTTTGACAGAGTATTGGTTGAAAGGAGTGCTGCCGAAACTGTAAC
CAAAGGTGGCATTATGCTTCCAGAAAAGTCTCAAGGAAAAGTGTTGCAAGCAACGGTCGTGGCTGTGGGGTCAGGAGGGA
AAGGAAAGAGTGGAGAGATTGAGCCTGTCAGTGTGAAAGTTGGAGATAAAGTTCTTCTCCCAGAATATGGAGGCACCAAA
GTAGTTCTAGATGACAAGGATTATTTCTTATTTAGAGATAGTGACATTCTTGGAAAGTATGTCGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 19 .06 RPM
SRP007412_cerebellum 18 .80 RPM
SRP007412_heart 39 .32 RPM
SRP007412_kidney 64 .04 RPM
SRP007412_liver 64 .07 RPM
SRP007412_testis 5 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013769 possible_ortholog 18 retrogenes
retro_amel_1027, retro_amel_1083, retro_amel_1084, retro_amel_1100, retro_amel_133, retro_amel_1504, retro_amel_1513, retro_amel_1623, retro_amel_1699, retro_amel_1819, retro_amel_199, retro_amel_23, retro_amel_269, retro_amel_310, retro_amel_329, retro_amel_491, retro_amel_506, retro_amel_922,
Canis familiaris ENSCAFG00000010890 possible_ortholog 4 retrogenes
retro_cfam_1768, retro_cfam_1883, retro_cfam_208, retro_cfam_556,
Choloepus hoffmanni ENSCHOG00000007417 ortholog_one2one 17 retrogenes
retro_chof_1048, retro_chof_1160, retro_chof_143, retro_chof_1476, retro_chof_1561, retro_chof_1755, retro_chof_1880, retro_chof_2052, retro_chof_2053, retro_chof_226, retro_chof_303, retro_chof_414, retro_chof_420, retro_chof_86, retro_chof_907, retro_chof_91, retro_chof_940,
Callithrix jacchus ENSCJAG00000004008 possible_ortholog 1 retrogene
retro_cjac_254,
Felis catus ENSFCAG00000014455 possible_ortholog 9 retrogenes
retro_fcat_114, retro_fcat_1174, retro_fcat_1406, retro_fcat_1686, retro_fcat_1723, retro_fcat_457, retro_fcat_681, retro_fcat_794, retro_fcat_97,
Gorilla gorilla ENSGGOG00000027944 possible_ortholog 17 retrogenes
retro_ggor_1051, retro_ggor_117, retro_ggor_1243, retro_ggor_1545, retro_ggor_157, retro_ggor_1676, retro_ggor_1821, retro_ggor_1956, retro_ggor_1957, retro_ggor_1958, retro_ggor_2331, retro_ggor_2391, retro_ggor_2476, retro_ggor_2492, retro_ggor_775, retro_ggor_841, retro_ggor_897,
Loxodonta africana ENSLAFG00000000057 possible_ortholog 1 retrogene
retro_lafr_69,
Macaca mulatta ENSMMUG00000010491 possible_ortholog 1 retrogene
retro_mmul_344,
Oryctolagus cuniculus ENSOCUG00000010360 possible_ortholog 1 retrogene
retro_ocun_127,
Otolemur garnettii ENSOGAG00000034434 possible_ortholog 24 retrogenes
retro_ogar_1018, retro_ogar_1441, retro_ogar_1512, retro_ogar_1690, retro_ogar_1744, retro_ogar_1899, retro_ogar_191, retro_ogar_1921, retro_ogar_200, retro_ogar_2030, retro_ogar_2129, retro_ogar_2310, retro_ogar_235, retro_ogar_2439, retro_ogar_2636, retro_ogar_2928, retro_ogar_3088, retro_ogar_3350, retro_ogar_3419, retro_ogar_389, retro_ogar_777, retro_ogar_824, retro_ogar_829, retro_ogar_834,
Pongo abelii ENSPPYG00000025876 possible_ortholog 1 retrogene
retro_pabe_179,
Rattus norvegicus ENSRNOG00000014868 possible_ortholog 6 retrogenes
retro_rnor_1094, retro_rnor_1320, retro_rnor_1334, retro_rnor_2245, retro_rnor_2296, retro_rnor_984,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_301 84.31 100.00
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2. retro_mmus_386 59.62 100.00
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3. retro_mmus_872 89.89 87.25
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4. retro_mmus_877 85.44 100.00
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5. retro_mmus_1005 60.82 93.14
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6. retro_mmus_1719 98.04 100.00
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7. retro_mmus_1750 86.49 72.55
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8. retro_mmus_1934 88.24 100.00
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9. retro_mmus_2483 73.08 100.00
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10. retro_mmus_2485 81.82 86.27
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11. retro_mmus_3077 60.92 85.29
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Download FASTA sequences of all ENSMUSG00000073676 retrocopies