RetrogeneDB ID: | retro_chof_420 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_106559:5835..6096(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HSPE1 | ||
Ensembl ID: | ENSCHOG00000007417 | ||
Aliases: | None | ||
Description: | heat shock 10kDa protein 1 (chaperonin 10) [Source:HGNC Symbol;Acc:5269] |
Percent Identity: | 72.41 % |
Parental protein coverage: | 85.29 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | VLVERSAAETVTKGGIMLPEKSQGKVLQATVLAVGSGAKGKGGQIEPVSVKVGDKVLLPEYGGTKVVLEE |
VLV.RSAAETVTKG.IMLPEKS.G.VLQATV..VGS..KGKGG..EP.S..VGDKVLLP.Y.GTKVVL.. | |
Retrocopy | VLVQRSAAETVTKGDIMLPEKSPGRVLQATVVVVGS*SKGKGGDTEPISMNVGDKVLLPKYAGTKVVLDD |
Parental | KEYFLFRDSDILGKYIE |
...FLFR..DIL.KY.E | |
Retrocopy | ENNFLFRVGDILEKYVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |