RetrogeneDB ID: | retro_chof_940 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_17262:12273..12579(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HSPE1 | ||
Ensembl ID: | ENSCHOG00000007417 | ||
Aliases: | None | ||
Description: | heat shock 10kDa protein 1 (chaperonin 10) [Source:HGNC Symbol;Acc:5269] |
Percent Identity: | 91.18 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVLAVGSGAKGKGGQIEPVSVKVGDK |
M.GQAFRKFLPLFDRVLVERSA.E.VTKGGIMLPEKSQGKVLQATVLAVGSGAKGKGGQIEPVS.KVGDK | |
Retrocopy | MSGQAFRKFLPLFDRVLVERSATEAVTKGGIMLPEKSQGKVLQATVLAVGSGAKGKGGQIEPVSMKVGDK |
Parental | VLLPEYGGTKVVLEEKEYFLFRDSDILGKYIE |
V.LPEYG..KVVLEEKEYFLFR.SDILGKY.E | |
Retrocopy | VFLPEYGVSKVVLEEKEYFLFRNSDILGKYTE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |