Parental gene:

HSPE1, ENSMMUG00000010491

Aliases:None
Description:heat shock 10kDa protein 1 (chaperonin 10) [Source:RefSeq peptide;Acc:NP_001182717]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:12:61118910..61121921(+)


>ENSMMUG00000010491
ATGGCAGGACAAGCGTTTAGAAAGTTTCTTCCACTCTTTGACCGAGTATTGGTTGAAAGGAGTGCTGCTGAAACTGTAAC
CAAAGGAGGCATTATGCTTCCAGAAAAATCTCAAGGAAAAGTATTGCAAGCAACAGTAGTCGCTGTTGGATCGGGTTCTA
AAGGAAAGGGTGGAGAGATTCAACCGGTTAGCGTGAAAGTTGGAGATAAAGTTCTTCTGCCAGAGTATGGAGGCACCAAA
GTAGTTCTAGATGACAAGGATTATTTCCTATTTAGAGATGGTGACATTCTTGGAAAGTACCTAGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 4 .26 RPM
SRP007412_brain_prefrontal_cortex 14 .44 RPM
SRP007412_cerebellum 3 .23 RPM
SRP007412_heart 19 .08 RPM
SRP007412_kidney 11 .50 RPM
SRP007412_liver 13 .14 RPM
SRP007412_testis 4 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007417 possible_ortholog 17 retrogenes
retro_chof_1048, retro_chof_1160, retro_chof_143, retro_chof_1476, retro_chof_1561, retro_chof_1755, retro_chof_1880, retro_chof_2052, retro_chof_2053, retro_chof_226, retro_chof_303, retro_chof_414, retro_chof_420, retro_chof_86, retro_chof_907, retro_chof_91, retro_chof_940,
Dasypus novemcinctus ENSDNOG00000013246 ortholog_one2many 27 retrogenes
retro_dnov_1088, retro_dnov_1117, retro_dnov_1214, retro_dnov_1375, retro_dnov_1391, retro_dnov_1405, retro_dnov_1412, retro_dnov_1428, retro_dnov_1445, retro_dnov_1546, retro_dnov_1647, retro_dnov_1652, retro_dnov_1686, retro_dnov_1821, retro_dnov_2176, retro_dnov_2291, retro_dnov_2413, retro_dnov_2569, retro_dnov_2625, retro_dnov_2652, retro_dnov_418, retro_dnov_481, retro_dnov_483, retro_dnov_490, retro_dnov_524, retro_dnov_554, retro_dnov_966,
Erinaceus europaeus ENSEEUG00000005040 possible_ortholog 6 retrogenes
retro_eeur_132, retro_eeur_278, retro_eeur_474, retro_eeur_611, retro_eeur_657, retro_eeur_698,
Mus musculus ENSMUSG00000073676 possible_ortholog 11 retrogenes
retro_mmus_1005, retro_mmus_1719, retro_mmus_1750, retro_mmus_1934, retro_mmus_2483, retro_mmus_2485, retro_mmus_301, retro_mmus_3077, retro_mmus_386, retro_mmus_872, retro_mmus_877,
Pongo abelii ENSPPYG00000025876 ortholog_one2many 1 retrogene
retro_pabe_179,
Pan troglodytes ENSPTRG00000012774 ortholog_one2many 17 retrogenes
retro_ptro_1033, retro_ptro_1117, retro_ptro_1152, retro_ptro_1591, retro_ptro_1752, retro_ptro_1907, retro_ptro_1908, retro_ptro_2343, retro_ptro_2406, retro_ptro_2485, retro_ptro_2847, retro_ptro_287, retro_ptro_374, retro_ptro_667, retro_ptro_726, retro_ptro_786, retro_ptro_926,
Sus scrofa ENSSSCG00000016078 ortholog_one2many 7 retrogenes
retro_sscr_103, retro_sscr_1059, retro_sscr_106, retro_sscr_1088, retro_sscr_294, retro_sscr_298, retro_sscr_401,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_344 100.00 100.00
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Download FASTA sequences of all ENSMMUG00000010491 retrocopies