RetrogeneDB - Parental gene ENSTBEG00000016629 details

                            
>ENSTBEG00000016629
ATGCTCCGCCAGATCCTGGGTCAGGCCAAGAAGCATCCGAGTTTGATTCCCCTGTTTATATTTATTGGAGCTGGAGGTAC

TGGAGCAGCACTGTATCTCATGCGTTTGGCAGTGTTCAATCCTGATGTCTCTTGGGACAGAAAGAATAACCCTGAACCTT

GGAACAAACTGGGTCCCAATGATCAGTACAAG

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000002493	ortholog_one2many	10 retrogenes	retro_amel_1356, retro_amel_1633, retro_amel_18, retro_amel_1800, retro_amel_1866, retro_amel_533, retro_amel_608, retro_amel_638, retro_amel_845, retro_amel_955,
Bos taurus	ENSBTAG00000011145	ortholog_one2one	7 retrogenes	retro_btau_1075, retro_btau_1155, retro_btau_1375, retro_btau_1454, retro_btau_1710, retro_btau_645, retro_btau_800,
Choloepus hoffmanni	ENSCHOG00000012330	ortholog_one2one	1 retrogene	retro_chof_2667,
Callithrix jacchus	ENSCJAG00000000748	ortholog_one2many	3 retrogenes	retro_cjac_3291, retro_cjac_36, retro_cjac_90,
Dasypus novemcinctus	ENSDNOG00000011217	ortholog_one2one	12 retrogenes	retro_dnov_1874, retro_dnov_1921, retro_dnov_2015, retro_dnov_2258, retro_dnov_2566, retro_dnov_2567, retro_dnov_2641, retro_dnov_349, retro_dnov_506, retro_dnov_725, retro_dnov_744, retro_dnov_764,
Equus caballus	ENSECAG00000026987	ortholog_one2one	1 retrogene	retro_ecab_370,
Felis catus	ENSFCAG00000024790	ortholog_one2one	4 retrogenes	retro_fcat_261, retro_fcat_449, retro_fcat_459, retro_fcat_905,
Homo sapiens	ENSG00000189043	ortholog_one2one	18 retrogenes	retro_hsap_1459, retro_hsap_200, retro_hsap_2374, retro_hsap_2386, retro_hsap_259, retro_hsap_2685, retro_hsap_2726, retro_hsap_285, retro_hsap_3241, retro_hsap_4067, retro_hsap_4188, retro_hsap_4292, retro_hsap_4699, retro_hsap_4700, retro_hsap_4750, retro_hsap_4856, retro_hsap_650, retro_hsap_877,
Gorilla gorilla	ENSGGOG00000001437	ortholog_one2many	3 retrogenes	retro_ggor_249, retro_ggor_30, retro_ggor_567,
Microcebus murinus	ENSMICG00000013999	ortholog_one2one	5 retrogenes	retro_mmur_1225, retro_mmur_1314, retro_mmur_133, retro_mmur_341, retro_mmur_696,
Myotis lucifugus	ENSMLUG00000006470	ortholog_one2many	6 retrogenes	retro_mluc_1778, retro_mluc_1821, retro_mluc_329, retro_mluc_450, retro_mluc_517, retro_mluc_849,
Macaca mulatta	ENSMMUG00000020894	ortholog_one2many	2 retrogenes	retro_mmul_272, retro_mmul_274,
Monodelphis domestica	ENSMODG00000014107	ortholog_one2one	2 retrogenes	retro_mdom_1095, retro_mdom_1593,
Mustela putorius furo	ENSMPUG00000014152	ortholog_one2one	8 retrogenes	retro_mputfur_1127, retro_mputfur_1600, retro_mputfur_416, retro_mputfur_696, retro_mputfur_711, retro_mputfur_790, retro_mputfur_827, retro_mputfur_880,
Mus musculus	ENSMUSG00000029632	ortholog_one2one	4 retrogenes	retro_mmus_2172, retro_mmus_3219, retro_mmus_3412, retro_mmus_3620,
Oryctolagus cuniculus	ENSOCUG00000029372	ortholog_one2many	1 retrogene	retro_ocun_41,
Otolemur garnettii	ENSOGAG00000000358	ortholog_one2many	17 retrogenes	retro_ogar_1023, retro_ogar_1026, retro_ogar_1319, retro_ogar_1403, retro_ogar_1566, retro_ogar_1960, retro_ogar_1976, retro_ogar_2050, retro_ogar_2350, retro_ogar_2528, retro_ogar_3023, retro_ogar_3413, retro_ogar_3434, retro_ogar_3457, retro_ogar_694, retro_ogar_731, retro_ogar_997,
Ochotona princeps	ENSOPRG00000014186	ortholog_one2one	3 retrogenes	retro_opri_1138, retro_opri_275, retro_opri_633,
Pongo abelii	ENSPPYG00000017780	ortholog_one2many	5 retrogenes	retro_pabe_2296, retro_pabe_24, retro_pabe_301, retro_pabe_3339, retro_pabe_678,
Pan troglodytes	ENSPTRG00000018934	ortholog_one2one	19 retrogenes	retro_ptro_1134, retro_ptro_1736, retro_ptro_1745, retro_ptro_1811, retro_ptro_182, retro_ptro_1842, retro_ptro_219, retro_ptro_2191, retro_ptro_235, retro_ptro_2756, retro_ptro_2844, retro_ptro_2908, retro_ptro_3034, retro_ptro_3123, retro_ptro_3165, retro_ptro_3233, retro_ptro_473, retro_ptro_766, retro_ptro_993,
Pteropus vampyrus	ENSPVAG00000006660	ortholog_one2one	5 retrogenes	retro_pvam_1092, retro_pvam_1436, retro_pvam_1441, retro_pvam_545, retro_pvam_798,
Rattus norvegicus	ENSRNOG00000005512	ortholog_one2one	3 retrogenes	retro_rnor_1880, retro_rnor_2327, retro_rnor_2985,
Sorex araneus	ENSSARG00000011125	ortholog_one2one	8 retrogenes	retro_sara_160, retro_sara_203, retro_sara_316, retro_sara_339, retro_sara_49, retro_sara_536, retro_sara_659, retro_sara_747,
Sus scrofa	ENSSSCG00000024313	ortholog_one2one	6 retrogenes	retro_sscr_1155, retro_sscr_367, retro_sscr_552, retro_sscr_642, retro_sscr_682, retro_sscr_733,
Tupaia belangeri	ENSTBEG00000015731	within_species_paralog	5 retrogenes	retro_tbel_3586, retro_tbel_4134, retro_tbel_4193, retro_tbel_822, retro_tbel_865,
Tarsius syrichta	ENSTSYG00000000041	ortholog_one2one	15 retrogenes	retro_tsyr_1427, retro_tsyr_1650, retro_tsyr_1766, retro_tsyr_1948, retro_tsyr_1973, retro_tsyr_1974, retro_tsyr_198, retro_tsyr_270, retro_tsyr_425, retro_tsyr_473, retro_tsyr_492, retro_tsyr_659, retro_tsyr_685, retro_tsyr_821, retro_tsyr_937,
Tursiops truncatus	ENSTTRG00000013045	ortholog_one2one	8 retrogenes	retro_ttru_1057, retro_ttru_132, retro_ttru_1709, retro_ttru_1745, retro_ttru_1841, retro_ttru_218, retro_ttru_257, retro_ttru_308,
Vicugna pacos	ENSVPAG00000010003	ortholog_one2one	1 retrogene	retro_vpac_262,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_tbel_436	86.67	93.75	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_tbel_815	82.81	100.00	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_tbel_1049	75.00	100.00	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_tbel_1848	90.62	100.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_tbel_2008	76.67	92.19	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_tbel_2058	84.21	89.06	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_tbel_2194	81.25	98.44	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_tbel_2274	89.06	100.00	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_tbel_2423	74.24	100.00	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_tbel_2761	100.00	89.06	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_tbel_3262	70.69	87.50	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_tbel_4255	89.06	98.44	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_tbel_4309	72.13	95.31	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_tbel_4380	75.00	100.00	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_tbel_4426	75.00	100.00	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_tbel_4719	67.69	100.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSTBEG00000016629 retrocopies

Parental gene:	NDUFA4, ENSTBEG00000016629
Aliases:	None
Description:	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa [Source:HGNC Symbol;Acc:7687]
Organism:	*Treeshrew (Tupaia belangeri)*
Coordinates:	GeneScaffold_5341:117181..118955(-)

Parental gene:

NDUFA4, ENSTBEG00000016629