RetrogeneDB ID: | retro_vpac_469 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | scaffold_22646:2271..2463(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSVPAG00000011162 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] |
Percent Identity: | 82.81 % |
Parental protein coverage: | 98.46 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | RSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVS |
RSRIQ.WLYEQVNM.IEG.I.GFDEYMNL.LDDAEEIHSKTKS.KQLG..MLKGD.I.L.QSVS | |
Retrocopy | RSRIQAWLYEQVNMQIEG*ITGFDEYMNLKLDDAEEIHSKTKSGKQLGGVMLKGDDIILFQSVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |