Parental gene: | RPL35, ENSCAFG00000020212 |
| Aliases: | None |
| Description: | ribosomal protein L35 [Source:HGNC Symbol;Acc:10344] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 9:58153977..58158559(+) |
>ENSCAFG00000020212
CAGGCTAAGATTAAGGCTCGAGATCTTCGCGGCAAGAAGAAGGAAGAGCTGCTTAAACAGCTGGAAGACCTGAAGGTGGA
GCTGTCCCAGCTGCGCGTCGCCAAAGTGACAGGCGGCGCGGCCTCCAAGCTCTCTAAGATCCGAGTTGTTCGCAAATCCA
TCGCCCGTGTTCTCACCGTCATCAACCAGACACAGAAAGAGAACCTCAGGAAATTCTACAAGGGTAAGAAGTACAAGCCC
CTGGATCTGCGGCCCAAGAAGACACGTGCCATGCGCCGCCGGCTAAACAAGCATGAGGAAAATCTGAAGACCAAGAAGCA
ACAGCGGAAGGAGCGGCTGTACCCTCTGCGGAAGTATGCGGTCAAAGCCTGA
CAGGCTAAGATTAAGGCTCGAGATCTTCGCGGCAAGAAGAAGGAAGAGCTGCTTAAACAGCTGGAAGACCTGAAGGTGGA
GCTGTCCCAGCTGCGCGTCGCCAAAGTGACAGGCGGCGCGGCCTCCAAGCTCTCTAAGATCCGAGTTGTTCGCAAATCCA
TCGCCCGTGTTCTCACCGTCATCAACCAGACACAGAAAGAGAACCTCAGGAAATTCTACAAGGGTAAGAAGTACAAGCCC
CTGGATCTGCGGCCCAAGAAGACACGTGCCATGCGCCGCCGGCTAAACAAGCATGAGGAAAATCTGAAGACCAAGAAGCA
ACAGCGGAAGGAGCGGCTGTACCCTCTGCGGAAGTATGCGGTCAAAGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 56 .13 RPM |
| SRP017611_kidney | 296 .04 RPM |
| SRP017611_liver | 83 .39 RPM |
| SRP012049_cerebellum | 226 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016537 | ortholog_one2one | 12 retrogenes | |
| Bos taurus | ENSBTAG00000003205 | ortholog_one2many | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000022811 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000009389 | possible_ortholog | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000012696 | ortholog_one2one | 8 retrogenes | |
| Felis catus | ENSFCAG00000030388 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004111 | possible_ortholog | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000010031 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000005260 | possible_ortholog | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000019753 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013950 | ortholog_one2one | 5 retrogenes | |
| Mus musculus | ENSMUSG00000062997 | possible_ortholog | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000011612 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002996 | possible_ortholog | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000019603 | possible_ortholog | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014272 | possible_ortholog | 14 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000004756 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000005595 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_294 | 59.84 | 96.75 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_529 | 64.65 | 78.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_738 | 53.51 | 90.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cfam_995 | 57.14 | 82.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cfam_1566 | 79.84 | 99.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cfam_1635 | 68.55 | 99.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_cfam_2180 | 59.82 | 90.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000020212 retrocopies