Parental gene:

COX5B, ENSEEUG00000000258

Aliases:None
Description:cytochrome c oxidase subunit Vb [Source:HGNC Symbol;Acc:2269]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:scaffold_232520:299..3702(+)


>ENSEEUG00000000258
ATGGCCTCAAGGTTACTTCGCGGAGCTGGAGCGCTGGCGGCGCAGGCCCTGCGGGCTCGCGGACCCAATGGGGTCACCGC
ACTGCGTTCTATGGCGTCCGGAGGGGGTATTCCTACTGATGAGGAGCAGGCGACGGGACTGGAGCGGGAGATCATGTTGG
CTGCTCGCAAGGGGCTGGATCCATACAATATGCTACCGCCTCCAAAGGTAGCCGCGGGCACCAAGGAAGACCCTAATTTA
GTCCCCTCCATCACCAACAAGCGAATAGTGGGCTGCATCTNNNNNNNNNNNNNNNNNNNNGTCATCTGGTTTTGGCTGCA
CAAAGAAACCCAGCGATGCCCTGGCTGTACCCATTACAAGCTGGTGCCCCACCAGTTGGCCCACTGA

Library Parental gene expression (RPM)
SRP017611_liver 88 .11 RPM
SRP017611_kidney 153 .78 RPM
SRP017611_brain 40 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005242 ortholog_one2many 7 retrogenes
Bos taurus ENSBTAG00000018542 ortholog_one2many 2 retrogenes
Canis familiaris ENSCAFG00000002387 ortholog_one2one 8 retrogenes
Callithrix jacchus ENSCJAG00000016911 ortholog_one2one 6 retrogenes
Dipodomys ordii ENSDORG00000014994 ortholog_one2one 3 retrogenes
Equus caballus ENSECAG00000007968 ortholog_one2one 3 retrogenes
Felis catus ENSFCAG00000001704 ortholog_one2one 7 retrogenes
Homo sapiens ENSG00000135940 ortholog_one2one 7 retrogenes
Gorilla gorilla ENSGGOG00000001142 ortholog_one2one 6 retrogenes
Loxodonta africana ENSLAFG00000009386 ortholog_one2one 2 retrogenes
Macropus eugenii ENSMEUG00000005855 ortholog_one2one 2 retrogenes
Myotis lucifugus ENSMLUG00000014512 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000011327 ortholog_one2one 8 retrogenes
Mus musculus ENSMUSG00000061518 ortholog_one2many 1 retrogene
Nomascus leucogenys ENSNLEG00000011668 ortholog_one2many 5 retrogenes
Oryctolagus cuniculus ENSOCUG00000017085 ortholog_one2one 2 retrogenes
Otolemur garnettii ENSOGAG00000016840 ortholog_one2one 3 retrogenes
Ochotona princeps ENSOPRG00000002030 ortholog_one2one 3 retrogenes
Pongo abelii ENSPPYG00000012078 ortholog_one2one 6 retrogenes
Pan troglodytes ENSPTRG00000012257 ortholog_one2one 7 retrogenes
Rattus norvegicus ENSRNOG00000016660 ortholog_one2many 2 retrogenes
Sorex araneus ENSSARG00000011275 ortholog_one2one 1 retrogene
Sarcophilus harrisii ENSSHAG00000017358 ortholog_one2one 3 retrogenes
Sus scrofa ENSSSCG00000008195 ortholog_one2many 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000010980 ortholog_one2many 3 retrogenes
Tupaia belangeri ENSTBEG00000012130 ortholog_one2one 4 retrogenes
Tursiops truncatus ENSTTRG00000013490 ortholog_one2one 5 retrogenes
Vicugna pacos ENSVPAG00000006560 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_402 65.48 64.06
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Download FASTA sequences of all ENSEEUG00000000258 retrocopies