RetrogeneDB ID: | retro_amel_1037 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192849.1:464164..464501(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS26 | ||
Ensembl ID: | ENSAMEG00000003260 | ||
Aliases: | None | ||
Description: | ribosomal protein S26 [Source:HGNC Symbol;Acc:10414] |
Percent Identity: | 60.5 % |
Parental protein coverage: | 98.28 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 4 |
Parental | TKKRRNNGRAK-KG-RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF-DAYVLPKLY |
TKK.R.NGRAK.KG...H.QPI.CTN...C.P..KAI.KF.I..IVEA...R.IS.A.VF..A.VLPKLY | |
Retrocopy | TKK*RHNGRAK<KG<SSHLQPIYCTNHVLCTPETKAIEKFLIWTIVEAT--RGISKAGVFFEA*VLPKLY |
Parental | VKL-HYCVSCAI-HSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM |
VKL..YCV.CAI.HS..VRN...EA.KD.T.PP.FR..G..P.PP.K.M | |
Retrocopy | VKL>NYCVKCAI<HSNMVRNCFGEAWKDLTTPP*FRTPGTYP*PPLKFM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |