RetrogeneDB ID: | retro_ttru_131 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1331:228098..228443(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTTRG00000008464 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS26 | ||
Ensembl ID: | ENSTTRG00000015012 | ||
Aliases: | None | ||
Description: | ribosomal protein S26 [Source:HGNC Symbol;Acc:10414] |
Percent Identity: | 90.43 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK |
MTKKRRNNG.AKKGRGHVQPIRCTN.ARCVPKDKAIKKF.IRNIVEAAAVRDISE.SVFD.YVLPKLY.K | |
Retrocopy | MTKKRRNNGHAKKGRGHVQPIRCTNSARCVPKDKAIKKFIIRNIVEAAAVRDISEVSVFDTYVLPKLYMK |
Parental | LHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM |
LHYC.SCAIHSKVVRNRSREARKD...PP.FRPAGAAPRPPPKPM | |
Retrocopy | LHYCMSCAIHSKVVRNRSREARKD*KTPP*FRPAGAAPRPPPKPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |