RetrogeneDB ID: | retro_amel_1240 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193084.1:448983..449322(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000006611 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS26 | ||
Ensembl ID: | ENSAMEG00000003260 | ||
Aliases: | None | ||
Description: | ribosomal protein S26 [Source:HGNC Symbol;Acc:10414] |
Percent Identity: | 94.69 % |
Parental protein coverage: | 97.41 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKL |
TKKRRNNGRAKKGRGHV.PIRCTNCA.CVPKDKAIKKFVIRNIVEA..VRDISEASVFDAYV.PKLYVKL | |
Retrocopy | TKKRRNNGRAKKGRGHVEPIRCTNCAHCVPKDKAIKKFVIRNIVEASTVRDISEASVFDAYVFPKLYVKL |
Parental | HYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKP |
HYCVSCAIHSKVVRNRSREARKD.TPPPRFRPAGAAPRPPPKP | |
Retrocopy | HYCVSCAIHSKVVRNRSREARKD*TPPPRFRPAGAAPRPPPKP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |