RetrogeneDB ID: | retro_meug_1538 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold443179:550..955(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26 | ||
Ensembl ID: | ENSMEUG00000009891 | ||
Aliases: | None | ||
Description: | ribosomal protein L26 [Source:HGNC Symbol;Acc:10327] |
Percent Identity: | 76.06 % |
Parental protein coverage: | 95.86 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 3 |
Parental | VTSDRSKNRKRHFNAPS-HIRRKIMSSPL-SKELRQKYNVRSMPIRKDDE-VQVVRGHYKGQQIGKVVQV |
VT.D..KN....FN..S.HI.RKIMSSPL.SKELRQKYNV.SM.I.KDDE..QVV.G.YK.QQIGKV.QV | |
Retrocopy | VTTDQNKN---YFNDLS<HI*RKIMSSPL<SKELRQKYNVHSMTI*KDDE<IQVV*GYYKRQQIGKVGQV |
Parental | YRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEKM |
Y..KYVIYIE.VQ..KANGTTVHVGIHP.KVVITR.KLDKD.KKILE.KAKS.QVGKEK.KYKEET.EKM | |
Retrocopy | YKNKYVIYIECVQLKKANGTTVHVGIHPTKVVITRQKLDKDHKKILE*KAKSHQVGKEKRKYKEETNEKM |
Parental | QE |
Q. | |
Retrocopy | QD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |