RetrogeneDB ID: | retro_shar_703 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL857848.1:12832..13112(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSSHAG00000007075 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 71.88 % |
Parental protein coverage: | 73.44 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI-FAGKQLEDGRTLS-DYNIQKESTLHLVLRLRGGII |
KTITLEVE..D..ENVKAKIQ.K..I.P..Q.LI.FA.KQLE.G.TLS..YNIQK.STLHLVLRL...I. | |
Retrocopy | KTITLEVELNDIFENVKAKIQYKGNISPHHQCLI<FAEKQLEYGQTLS<NYNIQKKSTLHLVLRL*RAIT |
Parental | EPSLRQLAQKYNCDKMICRKCYARLH |
EPSL.QLAQKYNCDKMI..KCY..LH | |
Retrocopy | EPSLCQLAQKYNCDKMIYHKCYDHLH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |