RetrogeneDB ID: | retro_amel_1759 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194226.1:238874..239091(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL40 | ||
Ensembl ID: | ENSAMEG00000011356 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.86 % |
Parental protein coverage: | 57.03 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | GRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQK-YNCDKMICRKCYARLHPRAVNCRKKKCGHTNNL |
G..LSDYN.QK.ST.HLVLR..GGIIEPSLRQLA.K..N.D.MICRK.YA.LHP.....RK.....TN.L | |
Retrocopy | GHDLSDYNRQKASTPHLVLRPWGGIIEPSLRQLAPK>NNRDEMICRKHYAHLHPHNLTHRKRR-SRTNSL |
Parental | RPKK |
.PKK | |
Retrocopy | HPKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |