RetrogeneDB ID: | retro_tsyr_528 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_133484:4085..4433(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SUB1 | ||
Ensembl ID: | ENSTSYG00000014069 | ||
Aliases: | None | ||
Description: | SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985] |
Percent Identity: | 85.83 % |
Parental protein coverage: | 92.13 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MPKSKELVSSSSS-GSDSDSEVDKKLKRKKQ-VAPEKPVKKQKTGETSRALSSSKQSSSSRDD-NMFQIG |
MPKSKELVSSSS..GS.SDSEVDKKLKRKKQ.VAPEKPVKKQKTGET.RALSSS.QS.S.RDD.....IG | |
Retrocopy | MPKSKELVSSSSL<GSYSDSEVDKKLKRKKQ<VAPEKPVKKQKTGET*RALSSSEQSGSGRDD<HVSKIG |
Parental | KMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQI |
KMRYVS..DF.GKVLIDIRE.WMDPEGEMKPGRKGISLNPEQWSQLKEQI | |
Retrocopy | KMRYVSIQDFTGKVLIDIRE*WMDPEGEMKPGRKGISLNPEQWSQLKEQI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |