RetrogeneDB ID: | retro_ogar_525 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873522.1:40623881..40624261(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SUB1 | ||
Ensembl ID: | ENSOGAG00000009012 | ||
Aliases: | None | ||
Description: | SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985] |
Percent Identity: | 77.34 % |
Parental protein coverage: | 99.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PKSKELVSSSSSGSDSDSEVDKKLK-RKKQVAPEKPVKKQKTGETSRALSSSKQSSS-SRDDNMFQIGKM |
P.S.ELVSSSSSGSD.DS.VDKKL..R.KQVA.EKPVKK.KT.ETSRALSSSKQS.S.SRD.N..QIGK. | |
Retrocopy | PESEELVSSSSSGSDIDSQVDKKLR<RTKQVALEKPVKKHKTDETSRALSSSKQSGSGSRDYNTCQIGKV |
Parental | RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL |
RY..V..FKGKV.IDIRE...DPEGEMKPG.KGISLNPEQ.SQLKEQISD...AVRKL | |
Retrocopy | RYIRVQGFKGKVPIDIREDQIDPEGEMKPGKKGISLNPEQRSQLKEQISDTEGAVRKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |