RetrogeneDB ID: | retro_ogar_1130 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873536.1:9877929..9878229(-) | ||
Located in intron of: | ENSOGAG00000003782 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SUB1 | ||
Ensembl ID: | ENSOGAG00000009012 | ||
Aliases: | None | ||
Description: | SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985] |
Percent Identity: | 73.27 % |
Parental protein coverage: | 79.53 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | RKKQVAPEKPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEM |
R.......K.....KTGETSRALSSSKQS.SSR.DN.FQIGKMRY..VR..KGK.L..I.E...DPEGEM | |
Retrocopy | RQQSKLLQKNL*RSKTGETSRALSSSKQSNSSREDNVFQIGKMRYINVRTLKGKFLL-I*ENIRDPEGEM |
Parental | KPGRKGISLNPEQWSQLKEQISDIDDAVRKL |
KPGRKGISLN.EQWSQLKEQISDIDDAVRKL | |
Retrocopy | KPGRKGISLNLEQWSQLKEQISDIDDAVRKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |