Parental gene: | CBX3, ENSGGOG00000025853 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 7:26431522..26443100(+) |
>ENSGGOG00000025853
ATGGCCTCCAATAAAACTACATTGCAAAAAATGGGAAAAAAACAGAATGGAAAGAGTAAAAAAGTTGAAGAGGCAGAGCC
TGAAGAATTTGTGGTGGAAAAAGTACTAGATCGACGTGTAGTGAATGGGAAAGTGGAATATTTCCTGAAGTGGAAGGGAT
TTACAGATGCTGACAATACTTGGGAACCTGAAGAAAATTTAGATTGTCCAGAATTGATTGAAGCGTTTCTTAACTCTCAG
AAAGCTGGCAAAGAAAAAGATGGTACAAAAAGAAAATCTTTATCTGACAGTGAATCTGATGACAGCAAATCAAAGAAGAA
AAGAGATGCTGCTGACAAACCAAGAGGATTTGCCAGAGGTCTTGATCCTGAAAGAATAATTGGTGCCACAGACAGCAGTG
GAGAATTGATGTTTCTCATGAAATGGAAAGATTCAGATGAGGCAGACTTGGTGCTGGCGAAAGAGGCAAATATGAAGTGT
CCTCAAATTGTAATTGCTTTTTATGAAGAGAGACTAACTTGGCATTCTTGTCCAGAAGATGAAGCTCAATAA
ATGGCCTCCAATAAAACTACATTGCAAAAAATGGGAAAAAAACAGAATGGAAAGAGTAAAAAAGTTGAAGAGGCAGAGCC
TGAAGAATTTGTGGTGGAAAAAGTACTAGATCGACGTGTAGTGAATGGGAAAGTGGAATATTTCCTGAAGTGGAAGGGAT
TTACAGATGCTGACAATACTTGGGAACCTGAAGAAAATTTAGATTGTCCAGAATTGATTGAAGCGTTTCTTAACTCTCAG
AAAGCTGGCAAAGAAAAAGATGGTACAAAAAGAAAATCTTTATCTGACAGTGAATCTGATGACAGCAAATCAAAGAAGAA
AAGAGATGCTGCTGACAAACCAAGAGGATTTGCCAGAGGTCTTGATCCTGAAAGAATAATTGGTGCCACAGACAGCAGTG
GAGAATTGATGTTTCTCATGAAATGGAAAGATTCAGATGAGGCAGACTTGGTGCTGGCGAAAGAGGCAAATATGAAGTGT
CCTCAAATTGTAATTGCTTTTTATGAAGAGAGACTAACTTGGCATTCTTGTCCAGAAGATGAAGCTCAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 24 .31 RPM |
| SRP007412_cerebellum | 19 .46 RPM |
| SRP007412_heart | 5 .22 RPM |
| SRP007412_kidney | 38 .68 RPM |
| SRP007412_liver | 24 .45 RPM |
| SRP007412_testis | 88 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005969 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000002897 | ortholog_one2one | 11 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007952 | ortholog_one2one | 8 retrogenes | |
| Gorilla gorilla | ENSGGOG00000000041 | within_species_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000024063 | within_species_paralog | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000006907 | possible_ortholog | 3 retrogenes | |
| Mus musculus | ENSMUSG00000029836 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016583 | possible_ortholog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000011713 | ortholog_one2many | 9 retrogenes | |
| Rattus norvegicus | ENSRNOG00000011814 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017913 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000016711 | ortholog_one2many | 4 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000006223 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_635 | 90.27 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_845 | 77.55 | 53.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_1928 | 73.27 | 55.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2281 | 81.76 | 92.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_2466 | 95.71 | 88.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ggor_2467 | 95.06 | 87.98 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000025853 retrocopies