Parental gene: | YWHAZ, ENSMODG00000006158 |
| Aliases: | None |
| Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 3:366258434..366302588(-) |
>ENSMODG00000006158
ATGGATAAAAATGAGCTGGTGCAGAAGGCCAAATTGGCTGAGCAGGCTGAGAGATATGATGACATGGCAGCCTGCATGAA
GTCTGTAACTGAGCAAGGAGCTGAATTATCCAATGAGGAGAGGAATCTTCTCTCTGTTGCTTACAAAAATGTCGTAGGGG
CCCGAAGGTCATCTTGGAGGGTCGTTTCAAGTATTGAGCAAAAGACGGAAGGTGCTGAGAAAAAACAGCAGATGGCCCGA
GAATACAGAGAGAAAATTGAGACCGAACTAAGAGATATCTGCAATGATGTGCTGTCTCTATTGGAAAAGTTCTTGATTCC
TAATGCTTCACAAGCAGAAAGCAAAGTTTTCTATTTGAAAATGAAAGGAGACTACTACCGTTACTTGGCTGAGGTTGCTG
CTGGTGATGACAAGAAAGGTATAGTGGATCAGTCACAACAAGCATATCAAGAAGCATTTGAAATCAGCAAAAAGGAGATG
CAACCAACGCATCCTATAAGATTGGGTCTGGCCTTGAACTTCTCTGTGTTCTATTATGAGATCCTGAACTCTCCAGAGAA
AGCCTGCTCCCTTGCAAAGACAGCTTTTGATGAAGCCATTGCTGAACTTGATACATTAAGTGAAGAATCATACAAAGACA
GCACACTAATAATGCAATTACTGAGAGACAACTTGACATTGTGGACATCGGACACCCAAGGAGATGAAGCTGAAGCAGGA
GAAGGAGGGGAGAATTAA
ATGGATAAAAATGAGCTGGTGCAGAAGGCCAAATTGGCTGAGCAGGCTGAGAGATATGATGACATGGCAGCCTGCATGAA
GTCTGTAACTGAGCAAGGAGCTGAATTATCCAATGAGGAGAGGAATCTTCTCTCTGTTGCTTACAAAAATGTCGTAGGGG
CCCGAAGGTCATCTTGGAGGGTCGTTTCAAGTATTGAGCAAAAGACGGAAGGTGCTGAGAAAAAACAGCAGATGGCCCGA
GAATACAGAGAGAAAATTGAGACCGAACTAAGAGATATCTGCAATGATGTGCTGTCTCTATTGGAAAAGTTCTTGATTCC
TAATGCTTCACAAGCAGAAAGCAAAGTTTTCTATTTGAAAATGAAAGGAGACTACTACCGTTACTTGGCTGAGGTTGCTG
CTGGTGATGACAAGAAAGGTATAGTGGATCAGTCACAACAAGCATATCAAGAAGCATTTGAAATCAGCAAAAAGGAGATG
CAACCAACGCATCCTATAAGATTGGGTCTGGCCTTGAACTTCTCTGTGTTCTATTATGAGATCCTGAACTCTCCAGAGAA
AGCCTGCTCCCTTGCAAAGACAGCTTTTGATGAAGCCATTGCTGAACTTGATACATTAAGTGAAGAATCATACAAAGACA
GCACACTAATAATGCAATTACTGAGAGACAACTTGACATTGTGGACATCGGACACCCAAGGAGATGAAGCTGAAGCAGGA
GAAGGAGGGGAGAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000008694 | ortholog_one2many | 2 retrogenes | |
| Bos taurus | ENSBTAG00000000236 | possible_ortholog | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000000580 | possible_ortholog | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000015844 | possible_ortholog | 5 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000001672 | possible_ortholog | 10 retrogenes | |
| Ficedula albicollis | ENSFALG00000005860 | ortholog_one2many | 1 retrogene | |
| Gallus gallus | ENSGALG00000010725 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000022133 | possible_ortholog | 9 retrogenes | |
| Monodelphis domestica | ENSMODG00000010174 | other_paralog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000014740 | within_species_paralog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016200 | within_species_paralog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000022285 | ortholog_one2many | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000734 | possible_ortholog | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000000276 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000018791 | ortholog_one2many | 7 retrogenes | |
| Pelodiscus sinensis | ENSPSIG00000003703 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000012671 | possible_ortholog | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000006062 | possible_ortholog | 2 retrogenes | |
| Taeniopygia guttata | ENSTGUG00000012078 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_255 | 90.36 | 80.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_446 | 69.23 | 52.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1589 | 75.56 | 54.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1664 | 76.15 | 95.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mdom_1763 | 83.33 | 75.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mdom_1815 | 56.29 | 65.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mdom_1875 | 52.11 | 57.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mdom_1958 | 71.21 | 53.47 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000006158 retrocopies