Parental gene: | RPLP0, ENSPCAG00000016429 |
| Aliases: | None |
| Description: | ribosomal protein, large, P0 [Source:HGNC Symbol;Acc:10371] |
| Organism: | Hyrax (Procavia capensis) |
| Coordinates: | GeneScaffold_3261:161361..164627(-) |
>ENSPCAG00000016429
ATGCCCAGGGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATCATCCAACTTTTGGATGATTATCCCAAATG
CTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGATCCGCATGTCCCTCCGTGGGAAAGCCGTGGTCC
TGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGAGGGCACCTGGAAAACAACCCGGCTCTGGAGAAACTGTTGCTT
CACATCCGAGGTAATGTGTTTGTGTTCACTAAGGAGGACCTTACAGAGATCAGGGACATGCTACTGGCTAACAAGGTGCC
AGCTGCTGCCCGTGCTGGTGCCATTGCCCCATGTGAGGTTACCGTGCCAGCGCAGAACACTGGTCTGGGTCCCGAGAAGA
CCTCCTTCTTCCAGGCTTTGGGCATCACCACGAAGATCTCCAGAGGCACCATTGAAATCCTGAGTGATGTGCAGCTGATT
AAAACTGGAGACAAAGTGGGAGCCAGCGAAGCGACCCTGCTGAACATGCTGAACATCTCCCCGTTCTCCTTCGGGCTGGT
CATCCAGCAGGTGTTTGACAATGGCAGCATCTACAATCCGGAAGTGCTTGACATCACCGAGGACACTCTGCATTCTCGCT
TCCTGGAGGGTGTCCGCAATGTTGCCAGCGTATGTCTGCAGATTGGTTACCCAACTGTTGCCTCAGTACCCCACTCTATC
ATCAATGGGTACAAGCGGGTTCTGGCTTTGTCTGTGGAGACTGATTACACCTTTCCACTGGCTGAAAAGGTCAAGGCCTT
CTTGGCTGATCCATCTGCATTTGTGGCTGCTGCCCCTGTGGCCGCCGCCGCCGCCGCTGCTCCTGCTGCTGCTTCAGCCC
CAGCCAAAGTTGAAGCCAAGGAAGAGTCGGAGGAGTCGGATGAAGATATGGGATTTGGTCTCTTTGACTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005144 | possible_ortholog | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000010227 | possible_ortholog | 5 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000002745 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008677 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000021812 | possible_ortholog | 5 retrogenes | |
| Equus caballus | ENSECAG00000015816 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000013354 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000089157 | ortholog_one2one | 7 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026582 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001970 | possible_ortholog | 11 retrogenes | |
| Macaca mulatta | ENSMMUG00000009157 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000067274 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005749 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003843 | ortholog_one2one | 4 retrogenes | |
| Petromyzon marinus | ENSPMAG00000001339 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005022 | ortholog_one2many | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000001148 | possible_ortholog | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000001623 | possible_ortholog | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000005658 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pcap_67 | 96.25 | 100.00 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_pcap_232 | 86.69 | 96.84 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 3. | retro_pcap_314 | 89.94 | 100.00 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 4. | retro_pcap_339 | 93.08 | 100.00 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 5. | retro_pcap_353 | 82.33 | 100.00 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 6. | retro_pcap_408 | 70.28 | 65.82 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSPCAG00000016429 retrocopies