RetrogeneDB ID: | retro_amel_1377 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193282.1:306076..306578(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000005144 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.29 % |
Parental protein coverage: | 53. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | LLDDYPKCFIVGADNVGSKQMQQIRMSLR-GKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGF |
.LDD..K.F.VGAD...S.QMQ.IRMS.....AVV.MGKNTMM..AIRGHLENNPALE.LLPHI.G..GF | |
Retrocopy | ILDDNSKRFTVGADSMDSTQMQPIRMSVH<SVAVVWMGKNTMMHEAIRGHLENNPALEELLPHIWGSLGF |
Parental | V-FTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSD |
V..TKEDLTEIRDMLLANKVPAA..AGA.AP.EVTVPAQ.TGLG..KTSFFQAL.I.TKISRGT.EILSD | |
Retrocopy | V<VTKEDLTEIRDMLLANKVPAATGAGATAPYEVTVPAQDTGLGSKKTSFFQALDIATKISRGTTEILSD |
Parental | VQLIKTGDKVGASEATLLNMLNISPFSFGL |
VQLIKT.D.V.ASEAT.LN..N.SPFS.GL | |
Retrocopy | VQLIKTRDRVEASEATQLNLPNVSPFSSGL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |