Parental gene:

RPS14, ENSTBEG00000006368

Aliases:None
Description:ribosomal protein S14 [Source:HGNC Symbol;Acc:10387]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_414:184550..187607(-)


>ENSTBEG00000006368
ATGGCACCTCGCAAGGGGAAGGAAAAGAAAGAAGAACAGGTCATCAGCCTTGGACCTCAGGTGGCTGAAGGAGAAAATGT
GTTTGGTGTCTGCCACATCTTTGCATCTTTCAACGATACCTTTGTCCATGTCACTGATCTTTCTGGCAAGGAAACTATCT
GCCGTGTGACTGGTGGGATGAAAGTGAAAGCCGACCGAGACGAATCCTCGCCGTATGCTGCCATGCTTGCTGCCCAGGAT
GTGGCCCAGAGGTGCAAGGAGCTGGGCATCACTGCCCTGCACATCAAGCTCCGGGCCACGGGGGGAAATAGGACCAAGAC
CCCTGGCCCTGGGGCCCAGTCAGCCCTCAGAGCCCTCGCCCGCTCGGGTATGAAGATTGGGAGGATAGAGGATGTCACCC
CTATCCCCTCCGACAGCACCCGCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTGTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015004 ortholog_one2one 1 retrogene
retro_acar_201,
Ailuropoda melanoleuca ENSAMEG00000004644 possible_ortholog 2 retrogenes
retro_amel_1390, retro_amel_524,
Bos taurus ENSBTAG00000008570 possible_ortholog 2 retrogenes
retro_btau_1109, retro_btau_213,
Canis familiaris ENSCAFG00000018094 possible_ortholog 2 retrogenes
retro_cfam_1589, retro_cfam_301,
Callithrix jacchus ENSCJAG00000020981 possible_ortholog 1 retrogene
retro_cjac_89,
Cavia porcellus ENSCPOG00000024408 possible_ortholog 2 retrogenes
retro_cpor_253, retro_cpor_284,
Echinops telfairi ENSETEG00000002899 ortholog_one2one 6 retrogenes
retro_etel_1270, retro_etel_1358, retro_etel_1851, retro_etel_1995, retro_etel_293, retro_etel_967,
Homo sapiens ENSG00000164587 ortholog_one2one 8 retrogenes
retro_hsap_119, retro_hsap_1622, retro_hsap_268, retro_hsap_3001, retro_hsap_3113, retro_hsap_3232, retro_hsap_3495, retro_hsap_3789,
Gorilla gorilla ENSGGOG00000024593 ortholog_one2one 8 retrogenes
retro_ggor_1225, retro_ggor_2080, retro_ggor_2135, retro_ggor_2199, retro_ggor_222, retro_ggor_2362, retro_ggor_2548, retro_ggor_316,
Latimeria chalumnae ENSLACG00000016164 possible_ortholog 1 retrogene
retro_lcha_12,
Macaca mulatta ENSMMUG00000002848 possible_ortholog 5 retrogenes
retro_mmul_1921, retro_mmul_1983, retro_mmul_358, retro_mmul_570, retro_mmul_90,
Mustela putorius furo ENSMPUG00000013776 possible_ortholog 1 retrogene
retro_mputfur_127,
Nomascus leucogenys ENSNLEG00000010366 possible_ortholog 1 retrogene
retro_nleu_101,
Oryctolagus cuniculus ENSOCUG00000011509 possible_ortholog 1 retrogene
retro_ocun_128,
Otolemur garnettii ENSOGAG00000000721 ortholog_one2many 1 retrogene
retro_ogar_286,
Pongo abelii ENSPPYG00000015950 ortholog_one2one 7 retrogenes
retro_pabe_1340, retro_pabe_2487, retro_pabe_2571, retro_pabe_2888, retro_pabe_3204, retro_pabe_401, retro_pabe_494,
Rattus norvegicus ENSRNOG00000018774 possible_ortholog 10 retrogenes
retro_rnor_1313, retro_rnor_1467, retro_rnor_1532, retro_rnor_1759, retro_rnor_1875, retro_rnor_1918, retro_rnor_2181, retro_rnor_228, retro_rnor_2728, retro_rnor_873,
Sarcophilus harrisii ENSSHAG00000018052 ortholog_one2one 3 retrogenes
retro_shar_380, retro_shar_381, retro_shar_503,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_202 76.03 78.81
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2. retro_tbel_416 74.29 92.05
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3. retro_tbel_519 69.91 73.51
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4. retro_tbel_740 63.22 56.95
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5. retro_tbel_1147 77.30 92.72
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6. retro_tbel_1332 71.43 95.36
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7. retro_tbel_1603 89.54 100.00
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8. retro_tbel_1868 86.33 92.05
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9. retro_tbel_3517 77.50 78.15
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10. retro_tbel_3619 65.79 72.85
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Download FASTA sequences of all ENSTBEG00000006368 retrocopies